Gene Jann_0667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0667 
Symbol 
ID3933110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp637055 
End bp638776 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content66% 
IMG OID637903014 
Productferuloyl-CoA synthase 
Protein accessionYP_508609 
Protein GI89053158 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.139624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGCG AGGATCGGGA CGACGGGGCG ATCCTGCTGC GCGCGCGGGC CGATATGGGG 
CCCGTGGCCG AGCGGACGAC CGATTGGTTG GACCATTGGG CAGAGGTGAC GCCGGAGGCC
GTGTTTCTGG CGGAGCGTGA CGGGCCGGGT TGGCGAGAGG TCAGCTACGC GGCGGCGCGG
GACGAGGCGC GCGCGATTGC GGTTGGGCTG ACGGATATGG ATCTGGGTCC GGGGCGGCCG
GTGATGGTCG TGACGGGGAA TTCTGTTGCC CATGGCCTCC TGGCCCTAGC GTGCCAATAT
GCAGGCGCGC CGGTGGTGCC GGTGGCCGAG CAATATGCGG CGCTACCTGC GGCGCGCGGC
CAGCTTGACC ATATCGCAAC GCTCATCCAG CCTGCGGCTG TCTTCGCGGA GACCCCGATG
GAGGAGGTGT TCACGCGGGA TAGCCTGGCG GCGGCCCGGC CCCTGACGGG GCAATCACTG
GATGCGCTGG CGCGTGTGGG GGGGCGGCTT GAAGCGCGTA TCGGCCCCGA CACGGTGGCG
AAGATCCTGA TGACGTCGGG CAGCACATCG GCCCCCAAGG GCGTGCTGAC GACGCATCGG
ATGATGTGCG TGAATCAAGC CCAGATCGCG GCGTGCTTGC CATTCCTGCG CGACCGCCCG
CCGGTTCTGG TCGATTGGCT GCCGTGGAAC CACGTCTTTG GCGGATCCCA TAATTTCAAC
CTTGTGCTTG CCAATGGAGG GTCGCTTTAC ATCGACGGTG GCAAGCCTGT GCCTGCGTTG
GTGGGGCAGA CGATTGAGAA CAATCGCCTT AAACAAGGGA CCATCAGCTT CAATGTGCCT
GTGGGGTTTG CCGCGCTGCG GGACGCGATG TTGGGCGACC GGGATTTTGC GCGCGCGTTC
TTTCAGGATC TGGACATGCT GTTTTATGCG GGCGCGTCGT TGCCGCAAGA CGTCTGGACG
GATCTGGACC GCATGGCCCG TGAGGTGCGG GACGATCTGC CGCTGTTCAC CTCGTCCTGG
GGGCTGACGG AGACGGCACC TGCGGCGCTG CTCCAGCATG AGCCGACAGA CCGCTCGGGC
GTGGTCGGGG TGCCCCTGCC GGGCGTCGAC GTGAAGCTGG TGCCCGCCGA GACGCGCTAT
GAGGTCCGCG TGCGGGGGCC GTCCGTGTTC AAGGGCTACC ACGGGAACGC GGCAAAGACA
GACGAGGCGT TCGACGAGGA CGGCTATTTC CGCACCGGCG ACGCGATGGC CTTTGTCGAT
CCATCAGACA TGAACCAGGG TCTTCGGTTT GACGGGCGCA TCAGCGAGGA TTTCAAGCTG
ATGTCCGGCA CCTGGGTGCG GGCCGCAGCG CTTCGGCTGC ACTTGCTTGA TGGGTTGAAG
GGCATCGCCC AGGACGTGGT TCTGGTGGGT GAAGAGCGCG CGGATGTGGG AGTGCTGATC
GTGCCCACGG CAGACATGAG AGAGAGCGCC CGGGACGACG GCGCAGCACT TTTGGCCAAC
GATCCGACCC CGATCATAGA GGTCCTGTCC GCCATGAAAG GTGGCAGCGC CGCGCGGGTC
ACACGGGCGC TGATCCTGTC GCAGCCGCCA TCCATTGCCG ATGGAGAGAT CACCGCCAAA
GGCAACCTCA ATTTCGCCCG GATCCGGGCC GGGCGCGCGG ATCTGATCGC GCGGCTCTAT
GATCCCTCGG ACCCCGCCTC GATCACTTTG GGAGAGCTGT GA
 
Protein sequence
MIREDRDDGA ILLRARADMG PVAERTTDWL DHWAEVTPEA VFLAERDGPG WREVSYAAAR 
DEARAIAVGL TDMDLGPGRP VMVVTGNSVA HGLLALACQY AGAPVVPVAE QYAALPAARG
QLDHIATLIQ PAAVFAETPM EEVFTRDSLA AARPLTGQSL DALARVGGRL EARIGPDTVA
KILMTSGSTS APKGVLTTHR MMCVNQAQIA ACLPFLRDRP PVLVDWLPWN HVFGGSHNFN
LVLANGGSLY IDGGKPVPAL VGQTIENNRL KQGTISFNVP VGFAALRDAM LGDRDFARAF
FQDLDMLFYA GASLPQDVWT DLDRMAREVR DDLPLFTSSW GLTETAPAAL LQHEPTDRSG
VVGVPLPGVD VKLVPAETRY EVRVRGPSVF KGYHGNAAKT DEAFDEDGYF RTGDAMAFVD
PSDMNQGLRF DGRISEDFKL MSGTWVRAAA LRLHLLDGLK GIAQDVVLVG EERADVGVLI
VPTADMRESA RDDGAALLAN DPTPIIEVLS AMKGGSAARV TRALILSQPP SIADGEITAK
GNLNFARIRA GRADLIARLY DPSDPASITL GEL