Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0660 |
Symbol | |
ID | 3933103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 630927 |
End bp | 631454 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637903007 |
Product | MarR family transcriptional regulator |
Protein accession | YP_508602 |
Protein GI | 89053151 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.327844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATGA CTGAAATCTA CACGATGCCG GGCCATCTGA TACGGCGTTT GCAACAAATC TCTATCTCGG TCTTTTCCGA CCGGATGCGT CGCCTGGGCC ACGACCTGAC CGCGCCGCAA TTTGCCACGC TGTCGGTGCT GGCGCGCGCG CCGGGCATTG ACCAGGCAAC CCTGGCGGGA TTGATCGCCC ACGACCGCCC CACCATCGGT GGCGTGGTGG AGAGGTTGGA GGCCAAGGGC CTTGTCACCC GCCACCAAAG CGAGAAGGAC CGCCGCGCCA AGGTTCTGGC CCTGTCGGAT GACGGCACGG CCCTGCTGGA GGCTCTTCTG CCCCATGTGC GCGAGATCCA GCCCGATATC CTTCCCGGAT TGTCGAGCGA CGAACGCACC GAGTTTATCC GCCTCGCCAC CAAAGTGGCC CATGCGGGCA ATGCCACGGC GCGGGCTCCC TATGCGGCAA GGGCGCCTCA CGATGCGGCG TCTTCGGTTG CGGGCAAATC CCAGTCAGGC TCGACCGAGC CCAGCTGA
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Protein sequence | MSMTEIYTMP GHLIRRLQQI SISVFSDRMR RLGHDLTAPQ FATLSVLARA PGIDQATLAG LIAHDRPTIG GVVERLEAKG LVTRHQSEKD RRAKVLALSD DGTALLEALL PHVREIQPDI LPGLSSDERT EFIRLATKVA HAGNATARAP YAARAPHDAA SSVAGKSQSG STEPS
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