Gene Jann_0660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0660 
Symbol 
ID3933103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp630927 
End bp631454 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content65% 
IMG OID637903007 
ProductMarR family transcriptional regulator 
Protein accessionYP_508602 
Protein GI89053151 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.327844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGA CTGAAATCTA CACGATGCCG GGCCATCTGA TACGGCGTTT GCAACAAATC 
TCTATCTCGG TCTTTTCCGA CCGGATGCGT CGCCTGGGCC ACGACCTGAC CGCGCCGCAA
TTTGCCACGC TGTCGGTGCT GGCGCGCGCG CCGGGCATTG ACCAGGCAAC CCTGGCGGGA
TTGATCGCCC ACGACCGCCC CACCATCGGT GGCGTGGTGG AGAGGTTGGA GGCCAAGGGC
CTTGTCACCC GCCACCAAAG CGAGAAGGAC CGCCGCGCCA AGGTTCTGGC CCTGTCGGAT
GACGGCACGG CCCTGCTGGA GGCTCTTCTG CCCCATGTGC GCGAGATCCA GCCCGATATC
CTTCCCGGAT TGTCGAGCGA CGAACGCACC GAGTTTATCC GCCTCGCCAC CAAAGTGGCC
CATGCGGGCA ATGCCACGGC GCGGGCTCCC TATGCGGCAA GGGCGCCTCA CGATGCGGCG
TCTTCGGTTG CGGGCAAATC CCAGTCAGGC TCGACCGAGC CCAGCTGA
 
Protein sequence
MSMTEIYTMP GHLIRRLQQI SISVFSDRMR RLGHDLTAPQ FATLSVLARA PGIDQATLAG 
LIAHDRPTIG GVVERLEAKG LVTRHQSEKD RRAKVLALSD DGTALLEALL PHVREIQPDI
LPGLSSDERT EFIRLATKVA HAGNATARAP YAARAPHDAA SSVAGKSQSG STEPS