| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0603 |
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| Symbol | rplE |
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| ID | 3933045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 582541 |
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| End bp | 583101 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637902949 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_508545 |
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| Protein GI | 89053094 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.697001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGGACA CAGCAAATTA TACCCCGCGC CTGAAGGCTG CTTTCAGCGA GACCATCAAG
GCCGCGATGA AAGAAGAGTT CGGTTACAAG AACGACATGC AGATCCCGCG TCTTGAGAAG
ATCGTTCTCA ACATCGGATC CGGTGCCGAG TCTGTGCGTG ACACCAAGAA GGCGAAATCC
GCTCAGGAAG ATCTGACGGC TATCGCAGGT CAGCACGCCG TCGTCACGAA GGCCAAGAAG
TCCATCGCGG GCTTCCGTCT GCGCGAAGAG CATCCCGTGG GCGCGAAAGT AACCCTGCGC
GGCGACCGCA TGTACGACTT TCTGGATCGC CTGACGACCA TCGCCATGCC CCGCATCCGG
GACTTCCGTG GTGTGAAGCC GTCCTTCGAT GGCCGCGGCA ACTTCGCCAT GGGCATGAAA
GAGCATATCG TTTTCCCCGA GATCAACTTC GACAAGATCG ATGTGGCCTG GGGCATGGAT
ATCATCATTG TCACAACGGC GAATACGGAC GCCGAGGCGA AGTCGCTTTT GGCGCACTTC
AACATGCCGT TTAACGCTTG A
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| Protein sequence | MLDTANYTPR LKAAFSETIK AAMKEEFGYK NDMQIPRLEK IVLNIGSGAE SVRDTKKAKS
AQEDLTAIAG QHAVVTKAKK SIAGFRLREE HPVGAKVTLR GDRMYDFLDR LTTIAMPRIR
DFRGVKPSFD GRGNFAMGMK EHIVFPEINF DKIDVAWGMD IIIVTTANTD AEAKSLLAHF
NMPFNA
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