| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0600 |
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| Symbol | rpsQ |
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| ID | 3933042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 581558 |
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| End bp | 581788 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637902946 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_508542 |
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| Protein GI | 89053091 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCAAAC GCATCCTGAC CGGCACCGTG ACCAGCGACG CCAACGAGCA AACCGTGACC
GTATCCGTGG AGCGTCGCTT CAAGCACCCG GTCATGCAGA AGACGATCCG GAAGTCCAAG
AAGTACCGGG CCCACGATCC GCAGAACAGC TTCAAGACCG GCGATCAGGT CCGCATTCAG
GAATGCGCCC CGGTCTCCAA ATCCAAACGC TGGGAAGTGA TTGTCGGTTA A
|
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| Protein sequence | MPKRILTGTV TSDANEQTVT VSVERRFKHP VMQKTIRKSK KYRAHDPQNS FKTGDQVRIQ
ECAPVSKSKR WEVIVG
|
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