| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0522 |
|---|
| Symbol | |
|---|
| ID | 3932963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 514001 |
|---|
| End bp | 514684 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637902867 |
|---|
| Product | ribonuclease III |
|---|
| Protein accession | YP_508464 |
|---|
| Protein GI | 89053013 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0571] dsRNA-specific ribonuclease |
|---|
| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCG CGCGGGAGCT GACGGCCTTC ATGGACCGCC TGGGGTATGT CTTTGAGGAC
CCCGCATTGC TCGCGCGCGC GCTGACCCAT TCGTCCCTGT CCTCGCCCAC GCGGGGCGAT
AACCAGCGGC TGGAGTTCCT GGGCGACCGC GTTCTGGGTT TGGTGATGGC CGAGGCCGTC
CTGGCCGCTG ACACGGACGC GAAGGAAGGT ACGCTTGCGC CGCGCTTCAA CGCGCTGGTC
CGCAAAGAGG CCTGCGCTGA CGTGGCCCGC CAGATTGATC TGGGTGCGGC CATGCGTCTT
GGCAAATCCG AGATGTCCGC AGGGGGCCGC CGCCGCATGG CGCTTTTGGG CGACGCGATG
GAAGCGGTGA TCGCCGCCGT CTATCTGGAT GGGGGCTTTG CAAGCGCGCG CGATCTGGTC
CTACGCCTCT GGTCCGAGCG GGTGCAAAGC GTCGAGGAAG ATGCGCGCGA CGCCAAAACG
GCGCTTCAGG AATGGGCGCA GGCCCGTGGT ATGGCGCCGC CGACATATAC CGAAGTTGCC
CGATCCGGCC CAGATCATGC GCCCGTTTTT CGAGTCCGCG TGACGCTGTC CTCCGGCGAA
AACGCGGAGG CTCAGGCCAA AGCCAAACGT CAGGCCGAGC AGCAGGCGGC GAAAGACTTA
CTGGCGCAGC TGGCGGGCGA ATGA
|
|---|
| Protein sequence | MKPARELTAF MDRLGYVFED PALLARALTH SSLSSPTRGD NQRLEFLGDR VLGLVMAEAV
LAADTDAKEG TLAPRFNALV RKEACADVAR QIDLGAAMRL GKSEMSAGGR RRMALLGDAM
EAVIAAVYLD GGFASARDLV LRLWSERVQS VEEDARDAKT ALQEWAQARG MAPPTYTEVA
RSGPDHAPVF RVRVTLSSGE NAEAQAKAKR QAEQQAAKDL LAQLAGE
|
|---|
| |