Gene Jann_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0501 
Symbol 
ID3932942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp499133 
End bp499522 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content64% 
IMG OID637902846 
ProductNUDIX hydrolase 
Protein accessionYP_508443 
Protein GI89052992 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGG TCTGTCCGGT GGTCCTGCGC CCGGGGCGGA GAGTTCTGGC GTTCAGGCAT 
CCCCAGGCAG GACTTCAACT GGTGAAGGGC GGCATCGAGT CCAATGAAGC GCCCGCCGCA
GCGGCTGCGC GGGAACTGTA TGAAGAGGCT GGCCTGTCCC TGTGGCCGGT GCGCGACCTG
GGCCACAGCA CCCGTATCGC GCGTGGCGAC ACCTGGCATT TCTGGCTCAT GGCTCACAGC
ATCCTGCCCG AGGCCTGGGA CCATCACACA GACGACGATG GCGGGCATCG CTTTGCCTTC
TTCTGGCACC CTATCGGTGA GCCTCCTCCC CCGGATTTCG CGCCGCCCTT TGTCCGTGCG
CTTGATCACA TTGCCGCAAC CATCCCATGA
 
Protein sequence
MDKVCPVVLR PGRRVLAFRH PQAGLQLVKG GIESNEAPAA AAARELYEEA GLSLWPVRDL 
GHSTRIARGD TWHFWLMAHS ILPEAWDHHT DDDGGHRFAF FWHPIGEPPP PDFAPPFVRA
LDHIAATIP