| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0418 |
|---|
| Symbol | |
|---|
| ID | 3932859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 421438 |
|---|
| End bp | 422079 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637902763 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_508360 |
|---|
| Protein GI | 89052909 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGACG TCGCGCTTTA CTTGCCCGGT ATCCTCCTTA GCTATGCGGC GTTTCTTCTG
GCCATCGCCA GTCCCGGTCC CAACATCCTC GCCGTCATCG GCACGTCGAT GGGGGTCAAC
CGACGCTCGG GCATGGCGCT GGCGATGGGG GTCGCGACGG GGTCCTTCAC ATGGGCGTTG
CTGACGGTGT TCGGCCTGTC GGCGCTGCTG GCGACCTACG CGCAGGCCCT GATTGCGATC
AAGATATTCG GCGGGCTGTA CCTGTTATGG CTGGCCTATA AGGCGTTCAA ATCCGCCATG
GCGTCCCATG ATATTGAAGC GACGGAACTG GCGGGCGGCA AGCGCTCTCC ATGGGGCTAT
GCGCGGCGCG GATACGTGAT CCAGATGACC AACCCCAAAG CGGCGCTGGC ATGGATCGCG
ATTATCTCGC TTGGATTGTC GGACGGCGCG CCCGCATGGG TCGGCGCGGT GATCGTGGTG
GGCACCTTCG CGCTGTCGAT CGCTATCCAT ATGCTCTACG CGATCGCGTT CTCCACGCCT
GTGATGGTGC GTCTCTACGG GCGGGCGCGC CGTGGGATCC AGGGCGTCTT GGGCACATTC
TTTGCCTATG CGGGCCTGCG TCTGTTGACG GACCGCACCT AA
|
|---|
| Protein sequence | MLDVALYLPG ILLSYAAFLL AIASPGPNIL AVIGTSMGVN RRSGMALAMG VATGSFTWAL
LTVFGLSALL ATYAQALIAI KIFGGLYLLW LAYKAFKSAM ASHDIEATEL AGGKRSPWGY
ARRGYVIQMT NPKAALAWIA IISLGLSDGA PAWVGAVIVV GTFALSIAIH MLYAIAFSTP
VMVRLYGRAR RGIQGVLGTF FAYAGLRLLT DRT
|
|---|
| |