| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0374 |
|---|
| Symbol | |
|---|
| ID | 3932815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 378024 |
|---|
| End bp | 381479 |
|---|
| Gene Length | 3456 bp |
|---|
| Protein Length | 1151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637902719 |
|---|
| Product | chromosome segregation protein SMC |
|---|
| Protein accession | YP_508316 |
|---|
| Protein GI | 89052865 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCTTCA CGAAGCTCAG ACTCAACGGA TTTAAGTCCT TCGTCGATCC CACGGACCTC
GTGATCGCGG ACGGCCTGAC CGGTGTTGTC GGGCCGAATG GTTGCGGAAA ATCCAATCTT
CTCGAGGCGT TACGTTGGGT GATGGGCGAA AACCGCCCCA CTGCCATGCG CGGCGCAGGG
ATGGAGGATG TGATTTTCGG CGGCGCCGCA ACGCGCAACG CCCGCAACTT TGCCGAAGTC
TCCCTGCAGA TCGACAACAC AGACCGCCTT GCGCCCGCGG GATTCAACGA AGAAGACCAG
ATCGACATCA TCCGCCGCAT CACCCGAGAT GCCGGAAGTG CTTATAAACT AAATGGAAAA
GATGTCCGCG CCCGCGACGT CTCGATGCTG TTTGCCGATG CCTCTACCGG TGCCCACAGC
CCCGCATTGG TGCGTCAGGG CCAGATTTCC GAGTTGATCA ACGCCCGCCC CAAAGCCCGT
CGGCGGGTGT TGGAGGAAGC CGCCGGGATC TCGGGCCTCT ATCAGCGCCG CCATGAAGCA
GAGCTGAAGC TGAAGGGAGC AGAGGCCAAT CTGGCGCGAA TTGACGACGT GTTGGATCAG
TTGGCGTCTC AGCTTAACAC CTTGGCAAGA CAGGCAAAAC AGGCCGCGCG GTATCGCGAG
ATCGGGACAG AGCTGCGCCT GACCGAAGGG CTCCTGCTGT TCGTGCGGTG GCGCGACGCC
GATGCTGCGC GCCTTCGCGC CGAGGACGCA TTGCGCGACG GTCTGACCGC TGCCGCCCAG
GCCGAAGTCG CGGCCCGCAC CGCCGTCGAG GCCCGCGAGC AGGCCGAAGA AGACCTGCCA
CCGCTGCGCG AAGAAGACAC GATTGCTGCC GCCATTCTCC AACGTTTGCT GGTCGAACGC
GACAATTTGC AGGCGGAGGC CGACCGCGCC GCCGCCGCCG TGGAGACGCT GACGAACCGG
ATCACCCAGA TCGACAAGGA TCGGGAGCGG GAAGAGGCGC TGAACTCCGA CGCAGGCGAA
ACCGTTGCGC GATTGCAGGC GGAACGCACC GAATTGCAGA CCGCCCAGAA GGGCCAGGAT
GCGCGTCTTG GCGATGCCCG AGATGCAGTG ACAGACGCGC GCAGCGTTCT TGCGGGGCAG
GAGGCGGAAC TCTCTGACCT CACAGAACAA TCTGCCGCCC TTGCCGCGCG TTACCAGGCC
ATTCAGCGCC GGATGGGAGA GGCCGAAAAG GCGGTGGCCC GCAACACAAC CGATGCGCAA
TCCGCAGAGC AAGCCGCCAG CGATGCGGCG GACCGACTGC AAACGCTCAA GCGCGAGGCG
GAGGAGACCG CGGATGCCCT GACCCGCGCC ACCGACCTTG CCGCGCGTGC CGAGGAAACG
CTGGTCGAGA CCGAGACCGC GCGGGCAGAC GCGCAAGCCA AAGAGACCGA CGCGCGCTCT
GCCCGGTCCG AGGCGGAAGG GCGCGCGGGC ACGTTGGATG CGGAGGTTAC AGCCCTGGCC
CGCGTGCTGG AACGCGAACG GGGCGACGGC ACGCAAGTCC TTGATGAAAT TAAGGTATCG
CCTGGGTTTG AGGCGGCAAT CGGTGCCGCG CTGTCCGATG ACCTGAAGGC CGCGCGGGCG
GATACTGAAG GCGCGACCGG ATGGACGGAT CTGCCGGACT ATGACGCCGC GGCCCCTCTG
CCCGAAGGCG CACAACCGGC TGCGGATGTT GCCCAGGCCC CGGACGTGTT GGCCCGCAGG
CTGTCGCATA TCGGCATTAT CGACGCCGCC GACGGGCCGC GTCTGCACTC GACGCTTCAG
CCCGGCCAGC GCCTTGTCAG CAAGGCCGGT GACCTGTGGC GCTGGGACGG ATTTGCCGTG
GCCGCCGCCG ACGCCGTGTC CACCGCCGCG CGTCGGTTGG AACAGGCGAA CCGGTTGTCG
GAACTGGAGG AAGAACGTCT GCGGGCCCGC GACAAGGCCG ATGATGCGAA GGCCGCCCAT
AAGGCGCTGG CCGAGCGGTT GGCCCATCTG ACGGAGGCCG ACAAGTCCGC CCGCACCGCA
CGGCGGGATG CCGAAACGCA GCTGAGCCAG GCCAGCCGCG CCGCCGCCCG GGCCGAGGCG
GACCAAAGCG TGTTGGATGG CAAGTTGGAG ACCCTTCGCC TGACCGCATC ACGCCACGCG
GAGGAGGCCG ACACCGCCCG CGCGGAGCTG ACCCGGGCCC GGGATGCACT GGCCGAGCTG
GACGATCTGG ACGCCGTACG CGGCCGTCTG GACGATGTCA AAGTGACCGT TGAGGCGGCG
CGGATGACGA TGTTGTCCAA GCGCGCCGCC TTCGATGAGA TCAAGCGCGA TGGTGAGGAT
CGAGTGTCGC GCATCGCCAA GATCGGCACC GAAATCACCA ATTGGCAGAA CCGCCTGACC
AACGCCGCGT CGCGTCTGGC GGAGTTGGAA AAGCGTCGGG GTGAGGCCGA AACCGCCCTG
GCGGAGGCGC GCGAAAAGCC CGCTCGGGTG GCGATGCGGC GAGAGCAATT GGCAATTCAG
ATCACGCAAG CCGAGGCACG CAAGGCGACC TCTGCCGATG CGCTGTCGGT GGGTGAAATG
AACCTCCGTG CGGCTAGCGG GGCTGAGCGG GACACCGAAC GCGCGGCAGG CGAAGCGCGG
GAACTGCGCG CCGCGTCCGA GGCCCGCCGT GATGCCGCGA TGGAAGCCGT ACGAACCGCC
GCCGACCGCA TCACCGAGGA GATGGAGCTG ACGCCGGAGG CGCTGCTGGA CACCCTTGGC
GATCTGCCCG CCCCCATGCC CCCCGCTGAC CGGATTGAGC AGGACGTCAT GCGCCTGCGC
CGTCAGCGCG ATGCCCTTGG CGCCGTGAAC CTCCGCGCCG AAGAGGACAG CCACGAGGTG
CAGGACGAAC ACGACACGCT GGCCTCCGAA AAGACCGATC TGGAAGAAGC GATCGCCAAG
CTGCGGACGG GGATCAACTC GCTGAACAAG GAAGGGCGGG AGCGGCTTCT GAAGGCGTTT
GACGAGGTGA ACACCAACTT CTCCCGCCTG TTCACGCACC TTTTTGGCGG CGGGGAGGCG
CGGTTGGTGC TGGTGGAATC CGATGATCCG CTGGAAGCGG GGCTGGAGAT CCTGTGTCAG
CCGCCGGGCA AGAAACTCTC GACCCTGTCG CTGCTATCGG GGGGGGAGCA GACGCTGACG
GCGCTGGCGC TGATCTTTGG GGTCTTCTTG GCCAACCCTG CGCCGATCTG TGTGCTCGAT
GAGGTCGACG CGCCGCTGGA TGATGCCAAT GTGACCCGGT TCTGCGACAT GCTCGATGAG
ATGACGCGGA GCACCAACAC GCGGTTCCTG ACGATCACCC ACCACGCCGT CACGATGGCC
CGCATGGACC GGCTGTTCGG GGTGACGATG GGGGAGCAGG GGGTGTCTCA GCTGGTCTCC
GTGGACCTGA AAGTAGCGGA GACTCTGGTG GCCTGA
|
|---|
| Protein sequence | MRFTKLRLNG FKSFVDPTDL VIADGLTGVV GPNGCGKSNL LEALRWVMGE NRPTAMRGAG
MEDVIFGGAA TRNARNFAEV SLQIDNTDRL APAGFNEEDQ IDIIRRITRD AGSAYKLNGK
DVRARDVSML FADASTGAHS PALVRQGQIS ELINARPKAR RRVLEEAAGI SGLYQRRHEA
ELKLKGAEAN LARIDDVLDQ LASQLNTLAR QAKQAARYRE IGTELRLTEG LLLFVRWRDA
DAARLRAEDA LRDGLTAAAQ AEVAARTAVE AREQAEEDLP PLREEDTIAA AILQRLLVER
DNLQAEADRA AAAVETLTNR ITQIDKDRER EEALNSDAGE TVARLQAERT ELQTAQKGQD
ARLGDARDAV TDARSVLAGQ EAELSDLTEQ SAALAARYQA IQRRMGEAEK AVARNTTDAQ
SAEQAASDAA DRLQTLKREA EETADALTRA TDLAARAEET LVETETARAD AQAKETDARS
ARSEAEGRAG TLDAEVTALA RVLERERGDG TQVLDEIKVS PGFEAAIGAA LSDDLKAARA
DTEGATGWTD LPDYDAAAPL PEGAQPAADV AQAPDVLARR LSHIGIIDAA DGPRLHSTLQ
PGQRLVSKAG DLWRWDGFAV AAADAVSTAA RRLEQANRLS ELEEERLRAR DKADDAKAAH
KALAERLAHL TEADKSARTA RRDAETQLSQ ASRAAARAEA DQSVLDGKLE TLRLTASRHA
EEADTARAEL TRARDALAEL DDLDAVRGRL DDVKVTVEAA RMTMLSKRAA FDEIKRDGED
RVSRIAKIGT EITNWQNRLT NAASRLAELE KRRGEAETAL AEAREKPARV AMRREQLAIQ
ITQAEARKAT SADALSVGEM NLRAASGAER DTERAAGEAR ELRAASEARR DAAMEAVRTA
ADRITEEMEL TPEALLDTLG DLPAPMPPAD RIEQDVMRLR RQRDALGAVN LRAEEDSHEV
QDEHDTLASE KTDLEEAIAK LRTGINSLNK EGRERLLKAF DEVNTNFSRL FTHLFGGGEA
RLVLVESDDP LEAGLEILCQ PPGKKLSTLS LLSGGEQTLT ALALIFGVFL ANPAPICVLD
EVDAPLDDAN VTRFCDMLDE MTRSTNTRFL TITHHAVTMA RMDRLFGVTM GEQGVSQLVS
VDLKVAETLV A
|
|---|
| |