Gene Jann_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0352 
Symbol 
ID3932793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp354688 
End bp355734 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content67% 
IMG OID637902697 
Producthypothetical protein 
Protein accessionYP_508294 
Protein GI89052843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTGGC AAGCCATATG GAATGAGGGA CGGGCCTTTC GGTCCCCGCC GGTCGTGCAA 
ACCGCGCCGT TGCGCGCCCT GACCTTGTGG CTGGAGCTGA TCGTGCCGCG CAGGCCCGCG
CCCCGTCGCG GTCGCGGTGT TGTGCGCGAC ATCCCTTTGC GCCTGTGGCA GGGCGCAGCA
GGTGGAGATC GTGCGATCAG CCTTTATCTG ATCCCCGACG GGTCCGTGCG GTTGTTGCAT
GGGGAAATCG ATCTGTGCAC GGAGCCGGGC ACATTGCGCC CGGGCGAGAC CCTTGGCGTG
CGCTATATCG CCTGCGCCAA AGGCCGCGAT GATGTGTTCG AGGTCACCAA CTTCGATCAG
GATCGCGTGC AGATCCTTCG CTCGGGCCTT GCCATTCAAT CGACCCTCGG TGACGCATTG
CCCCGGTCCG ACGGCTTCTT GTCCATCGCC CATGTGGCTG CGGTCGCGGC AAGCGCCATG
TCGGCGACAG ACCTGCCCGG CATCGAAGGG CGGGCTTTGA TCGCGACCGT TGACGGCGCC
CGCGCGATCG AGACGCTGCG CCCCGGAGAT GAGTTGCTGG ACAGTCAAGG CACGCCCCAT
CCCCTGCGCT GGATCGAAGC GCGTCCCCGG CTATGCCTCG GACGCACCGC GCCAATCCGA
CTGCGCGCCC CTTATTTCGG GCTGCGCCGC GATCTTGTGG TCACGCCCCA GACCCGGCTT
CTGCAAACGG GCCCCATCGT TGATTACCTC TGCGGGACCG ACGCCGTGCT GGCCAGTGCC
GCGGATCTGG CCACAGGCCG CGCGGTGGTG CGCGACCGCA CCAAGCCGAT GCGGATCTTC
TATCACCTGA TGCTGGATGA TCCGGCTTGT CTATTGGTCG AGAACTGCCC GATGGAAACG
GCACATCTGG GCGATGTGAT GGCCCTGGGC GGTCGCCAGA TCAGCCAGGC GGCCTGCCCC
GTCCTGTCCG ATGTCACGCC ATCGCTGCCG CTGCTGGATC GGGCCGCGGC GCGGGCACTG
GTGACGGCCC ACGCTCGGGC GGCCTGA
 
Protein sequence
MSWQAIWNEG RAFRSPPVVQ TAPLRALTLW LELIVPRRPA PRRGRGVVRD IPLRLWQGAA 
GGDRAISLYL IPDGSVRLLH GEIDLCTEPG TLRPGETLGV RYIACAKGRD DVFEVTNFDQ
DRVQILRSGL AIQSTLGDAL PRSDGFLSIA HVAAVAASAM SATDLPGIEG RALIATVDGA
RAIETLRPGD ELLDSQGTPH PLRWIEARPR LCLGRTAPIR LRAPYFGLRR DLVVTPQTRL
LQTGPIVDYL CGTDAVLASA ADLATGRAVV RDRTKPMRIF YHLMLDDPAC LLVENCPMET
AHLGDVMALG GRQISQAACP VLSDVTPSLP LLDRAAARAL VTAHARAA