| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0329 |
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| Symbol | thiP |
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| ID | 3932769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 334134 |
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| End bp | 335699 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637902674 |
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| Product | thiamine transporter membrane protein |
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| Protein accession | YP_508271 |
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| Protein GI | 89052820 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | [TIGR01253] thiamine ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.356206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAC GCGCTCAGCC AATAACGCTG GTGCAGGGGA TCGGCGGGGC GTTTGTCCTG
CTGGTTATCC TCGCGATCCT CGGCCCCCTC GGCGCAGTGA TGATCCGGGC TGAGGGGGTC
AATGGTTTGC GCCCTGCCGA TTGGGCGGCC GTCCGGTTTA CGCTTCTTCA AGCGGTCCTG
TCTGCCGTTG TGTCCTGCGT CGCGGCGATC CCCGTTGCGC GGGCCTTGGC GCGGCGGCGG
TTCCGCGGGC GCGGCGCGTA TATCGCCCTG ATGGGCGCGC CATTCATCCT GCCGGTCATT
GTCGCCGTGA TGGGCCTTCT GGCGATCTTC GGACGCGCAG GTTGGCTGAA TGCCGCACTG
GAAGGGATCG GCGCGGGCAC GATTGAGATT TATGGCCTCG CGGGCGTCGT CATGGCCCAC
GTTTTCCTGA ACCTGCCGCT CGCCACGCGG CTGATTTTGC AGGCGTGGTT GTCTGTCCCG
TCTGAGCGCA TCCGCCTTGC CCATTCACTC AATTTCACCG CCCAGGACAT GCGCCGCCAT
TTTGAGTGGC CGTTGCTGCG GGCCACGCTG CCCGGCGCGG CGCTGATTAT TTTCCTCATC
TGCACCACCA GCTTTGCCGT CGCCTTGATC CTTGGCGGTG GACCATCTGC GACAACCGTT
GAACTTGCGA TCTACCAGGC GTTTCAGTTC GACTTCGATC TGGGCCGTGC GGCCCTTCTG
GGCCTGATCC AGGTGGGTAT CTGCGTCGGT GCGGGTGTGG TTGCCTGGCG CTTCGCCACC
GCGACAGAGT TCGGCGGCGG GCTGGACCGC CCCGCGATGC ATTGGCCCGG TGATCCGCAT
CTGTCCCGCC TGTGGGACGG CCTCGCCTTA TTCGCCGCGG GCGCTTTCTT GCTGCTGCCG
CTGGCCGCTG TCACCGGCCA AGGCGTTGGC GCAATTGCCG GCCTGCCCCT TTCCACGTGG
GAGGCCGCTT TGCGTTCGAT CCTCCTCGCC CTCGCCTCCA CCGCATTTGC GGTCACTCTG
GCCCTGCCGA TCGCGCTTTT GATCGCGGGC AAGGCGGCGC GGGCTGGTCT TGAGGGCGTC
AGCCTGCTGT CCATCGCGGT GTCTCCACTG GTGATCGGCA CCGGGTTGTT CCTGATCGTC
TTTCCAATCG CCGACCCTGT GGCCCTGTCT TTGCCGATCA CGGGCCTGGT GAACGCATTG
GTGGCGCTAC CTTTCCTGCT CCGCGCACTT ATCCCCGCCG CGACCCAAGC CGAGGCAACG
CAAGGCCGCT TGGCAGACGC CCTTGGAATG CAGGGAACGG CCCGTCTGCG CCACGCGATC
CTGCCGCGCG TGCGCCGCCC CTTGGGGTTT GGCGCGGGCC TCGCCGCAGC GTTTTCCATG
GGCGACCTTG GCGTGATCGC TCTGTTCTCC ACCCAGGGGC AAGAGACCCT GCCGTTGGAG
ATGTATCGCC TGTTCGGCTC CTACCGCACC AACGATGCAC AGGGGGCCGC CGTGCTGCTC
ATGGCGTTGT CGCTGGGGAT GTTCTGGCTG TTTGACCGAG GGGGCCGCGT GAATGCTGCA
TCTTGA
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| Protein sequence | MAKRAQPITL VQGIGGAFVL LVILAILGPL GAVMIRAEGV NGLRPADWAA VRFTLLQAVL
SAVVSCVAAI PVARALARRR FRGRGAYIAL MGAPFILPVI VAVMGLLAIF GRAGWLNAAL
EGIGAGTIEI YGLAGVVMAH VFLNLPLATR LILQAWLSVP SERIRLAHSL NFTAQDMRRH
FEWPLLRATL PGAALIIFLI CTTSFAVALI LGGGPSATTV ELAIYQAFQF DFDLGRAALL
GLIQVGICVG AGVVAWRFAT ATEFGGGLDR PAMHWPGDPH LSRLWDGLAL FAAGAFLLLP
LAAVTGQGVG AIAGLPLSTW EAALRSILLA LASTAFAVTL ALPIALLIAG KAARAGLEGV
SLLSIAVSPL VIGTGLFLIV FPIADPVALS LPITGLVNAL VALPFLLRAL IPAATQAEAT
QGRLADALGM QGTARLRHAI LPRVRRPLGF GAGLAAAFSM GDLGVIALFS TQGQETLPLE
MYRLFGSYRT NDAQGAAVLL MALSLGMFWL FDRGGRVNAA S
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