| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0257 |
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| Symbol | |
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| ID | 3932695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 258706 |
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| End bp | 259374 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637902600 |
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| Product | ABC transporter related |
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| Protein accession | YP_508199 |
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| Protein GI | 89052748 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC CGCTCCTGTC CCTCCGCGAT ATTCGCAAGA CCTACCCGTC TGACTCTGGC
CCTTTGCGGG TGCTGGACGG CGTGTCCGTG ACGCTGGACG CGGGCGAAAC CCTGGCGCTG
ACGGGGGAAA GCGGCTCGGG CAAATCCACG CTGCTCCACC TGTCCGGCGG CCTCGACCAG
CCCGATGGTG GGGAGGTCGT GCTGGACGGC CAAGACATCG GCCGCCTTGA TGATGCCGGG
CGGGCGGCGG TGCGTCGAAC GCGGATCGGG TTGATCTTTC AGCAGTTCAA CCTTGTGCCG
TCATTATCCG TGGGTGCCAA TATCGCGCTG CAGGCACGGC TTGCCGGACA ACATGATGAG
GGCTTTGCTT TGCGACTGGC CGACCGGCTT GGGTTGAGCG ACCTGCGCAA CCGATACCCC
GAGCAACTGT CCGGCGGACA GCAACAGCGC GTCGCCATCG CCCGGGCGCT GGCCTCCAAG
CCCGCGTTGA TCCTGGCCGA TGAACCGACC GGCAATCTGG ATGAGGAAAC CGGGGACGCG
GTCCTGCGCC TGCTTTTGGA GCTGGTGGAG GAAACAGGCG CGGGGCTTCT GATGGTCACC
CATTCGCCTC GGCTGGCCGA ACGTTTGTCG CGGCGCGTGC ATCTGTCCCG TGGCCAATTG
GACGGCTAG
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| Protein sequence | MTAPLLSLRD IRKTYPSDSG PLRVLDGVSV TLDAGETLAL TGESGSGKST LLHLSGGLDQ
PDGGEVVLDG QDIGRLDDAG RAAVRRTRIG LIFQQFNLVP SLSVGANIAL QARLAGQHDE
GFALRLADRL GLSDLRNRYP EQLSGGQQQR VAIARALASK PALILADEPT GNLDEETGDA
VLRLLLELVE ETGAGLLMVT HSPRLAERLS RRVHLSRGQL DG
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