| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0214 |
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| Symbol | |
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| ID | 3932651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 209068 |
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| End bp | 209889 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637902556 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_508156 |
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| Protein GI | 89052705 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.848634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAGA CCCGGACATC CACGTCCATG CTGGCGCTGA TCTTCAATTT CCTGGAGGTC
ACCTACCACG CCGCCGCGCG CAAGGTCCGG AAAAACCACG GCAACGCGGT TCTGTCGATT
GTCCTGTCGA TCCTGCAAAG CGTCATGTTC ATCGCCGCGT TCTACTTCAT GTTCACCTTC
CTGGGGGGTC GCTCCGCCGC CCTGCGCGGC AACTTCATGG TCTATCTGAT GAGCGGGATT
TTCCTGTATC TCACGCATAT TCAGACCGTG CGCGCCGTGA TGGGGGCCGA TGGTCCGACC
AGCGCGATGA TGCAGCACGG GCCGATGAAC ACGCTTGTGT CCATCCTGTC TGAGGCGCTG
GCCGTCCTCT ACACCCAAAC CATTGCGCTG CTGTGCATTC TGCTCCTGAT CCACACCGTC
ATCCTGCCCG TCCATATCGA AGATTGGCCC GGTGCGATGC GGATGTTCCT GCTGGCCTGG
GGCAGCGGTG TGGCGCTGGG TATCATTCTG ATGGCTTGGA AGCCGTGGAT GCCGGACGTC
GTGCAGATCC TGTCGATGGT CTACATTCGG GCGAACATGA TCTTCTCAGG TAAAATGTTT
CTCGCCAATT CCATGCCCGC GATGATGCTG CCAGCGTTTC AGTGGAACCC GCTGTTTCAC
ATCATCGACC AGACGCGGGG ATATGTGTTT GTGAATTACT TCCCGCACAA CACAAACGTC
GCCTATCCGT TCTACTTCAC GCTCGGCGCC ATTTTGTTCG GCATGATGTT TGAGGCATAT
ACCCGCAAAC ATGCCTCCTC CAGTTGGGAC GCAAAGCGCT AG
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| Protein sequence | MFETRTSTSM LALIFNFLEV TYHAAARKVR KNHGNAVLSI VLSILQSVMF IAAFYFMFTF
LGGRSAALRG NFMVYLMSGI FLYLTHIQTV RAVMGADGPT SAMMQHGPMN TLVSILSEAL
AVLYTQTIAL LCILLLIHTV ILPVHIEDWP GAMRMFLLAW GSGVALGIIL MAWKPWMPDV
VQILSMVYIR ANMIFSGKMF LANSMPAMML PAFQWNPLFH IIDQTRGYVF VNYFPHNTNV
AYPFYFTLGA ILFGMMFEAY TRKHASSSWD AKR
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