| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0199 |
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| Symbol | trmE |
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| ID | 3932636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 190266 |
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| End bp | 191546 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637902541 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_508141 |
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| Protein GI | 89052690 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.649237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCAGACGA TTTTCGCTCA GGCAACGGCC CGGGGGAAAG CGGGCGTTGC GATTATTCGA
ATTTCGGGAC CAGATGCGTT TGAAGTTGGG CGGTGTCTGC TGGGCTCGCT TCCTGACGCG
GGCCGGTTTG CTCTTCGCGA CGTGAGGACG CCGCTGGGTG AATTACTGGA TCGTGGTCTC
GTGTTGGTAT TTAAGGCTCC AGCCAGCTTT ACCGGTGAAG ACACGGTTGA ACTGCAGCTC
CACGGCAGTG TTGCGGTGGT GCGGGCTGTT GAGGGCGCAA TTCGAAGCAC AGGTCTGGCA
CGGCTCGCTG ATGCTGGAGA GTTTACACAG CGGGCGTTGT TGAACGATAT GTTGGACCTG
ACCCAGGTTG AAGGACTTGG CCGCTTAATC GATTCAGAGA CAGAAGCTCA ACGGAAAGTC
GCTCAGGCGA GCTTCGAAGG TGGATTGTCA GACAAGGCTG AGCGTTGGCG GCACCTGATG
ATCCGGGCTG CGGCGCTGTT GGAGGCCTCC ATAGACTTCG TTGATGAAGA TGTGCCGGTT
GATGTTGTCC CGGAGGTCCA AAGCATCCTG ATGGGCTTGG ATACCGATTT AGCCAAGGAA
GTCACGGGGG CCGTTGTGGC CGAACGTCTA CACGACGGTT TTGAAGTTGC GATTCTTGGG
GCGCCCAACG CTGGAAAATC CACACTTCTC AACGTATTAG CGGATCGTGA GATAGCTATC
ACGTCAGATG TGCCTGGGAC TACGCGGGAT GTTATCGAAG CGCGCTTGGA CGTTTCTGGA
TTGCCGGTCA CCTTTTTGGA CACGGCGGGC ATACGGGATA CCGTTGATGT AATAGAGAAG
ATAGGCGTTC AACGGGCGAT TGATCGGGCG TTGGCGGCTG ATGTGAGAAT TCTTCTGGAA
ATAGATGACT GGATATTGCC GGACGTGCTA TCCGATACAA TCGACTTTCG GTACCGGGCG
AAGGCCGACT TGAGCGATGG TGAGGGTATC TCAGGGCGTA CTGGCGTCGG TATCGATAGG
TTGTTGACGG ATATTGAAGG CGTGCTGTCG GAGAAAATGA GTGCTGTCCG ATCCGCTGTT
ACTGATCGTC AACGGGGTGG TATTGAGGCG GCAAGGGTCT CTTTGGATGC CGGGGTAACG
GTCTTGTCTG GGACCGCAGA GTTAGAGTTG GCTGCAGAAC ACATTCGTCA CGCACAGCGA
TCGCTTGACT CCGTTATTGG TCGTGTGGAT GTAGAGAATC TCTTGGGTGA AATTTTTTCC
CGATTTTGTA TTGGGAAGTA G
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| Protein sequence | MQTIFAQATA RGKAGVAIIR ISGPDAFEVG RCLLGSLPDA GRFALRDVRT PLGELLDRGL
VLVFKAPASF TGEDTVELQL HGSVAVVRAV EGAIRSTGLA RLADAGEFTQ RALLNDMLDL
TQVEGLGRLI DSETEAQRKV AQASFEGGLS DKAERWRHLM IRAAALLEAS IDFVDEDVPV
DVVPEVQSIL MGLDTDLAKE VTGAVVAERL HDGFEVAILG APNAGKSTLL NVLADREIAI
TSDVPGTTRD VIEARLDVSG LPVTFLDTAG IRDTVDVIEK IGVQRAIDRA LAADVRILLE
IDDWILPDVL SDTIDFRYRA KADLSDGEGI SGRTGVGIDR LLTDIEGVLS EKMSAVRSAV
TDRQRGGIEA ARVSLDAGVT VLSGTAELEL AAEHIRHAQR SLDSVIGRVD VENLLGEIFS
RFCIGK
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