| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0137 |
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| Symbol | |
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| ID | 3932574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 127409 |
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| End bp | 129025 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902479 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_508079 |
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| Protein GI | 89052628 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.239979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC ACCACGGTGG AAAAATCCTT GCGGATCGGT TGGCGCTGCA TGGGGTGGAG
CGTGTGTTTT CCGTCCCCGG GGAGAGTTTT CTGGCCGCGC TGGACGGGCT CTATGACCAT
GATATCCCGA ACATTGTCTG CCGCCAGGAA GGCGGCGCTG CGATGATGGC AGAGGCCCAC
GGGAAGATGA CGGGGACTCC CGGCGTGCTG TTTGTCACGC GCGGACCGGG GGCCACGAAT
GCAAGTGCGG GCCTTCATAT CGCCATGCAT GACGCGACGC CTCTGGTGTG TTTCGTGGGG
CAGATCCCCC TGAAGCACCG TGATAGGGGT GTATTTCAAG AAGTTGATTA CAGGGCGTTT
TTCGGACCTT TGGTAAAGTG GTCGGCGGAG GTGGAGCGCA CGGATCGCCT GGCCGAATAC
ATTGACCGGG CGTTTGCGGT GGCCCAGGCC GGGCGACCCG GCCCGGTGGT TCTGGCCCTG
CCTGAGGATA TCCTGTGTGC GATGGCCGAG CCGCCAAAAC AACGCCCCGG TGCCCGCGCG
ATGGGACGCG TACACCCCGA CGATATCGCG CCGATGGTGG AGGCGTTTAA GCTGGCCAAA
CGCCCCCTGA TCCTTTGCGG TGGGCCCCAT TGGGGTGACG TGGAGAAGCA AACCGCGCAG
GCCTTGGCTG AACGGACAGG CGCGCCGATT GCGGTGACGT TCCGGCGGCA GGACTACATC
GACAACGACC ACCCCAACTA TGCCGGAGAT CTGGGCGTCG GTGCGAACCC TGCGCTACAA
AAACGGCTCG GCGATGCGGA TTGTGTCCTG CTGCTCGGGG CCGAACTCAA CGATATCACG
ACCGCCGATT TCACTCTGAT CGACCCCGCT GATCCGCCCA CGATTTTGCA GGTGGCACCC
ACGCCAGAGG CGACGTCCAA AACCTATCCC GCGACCCTTG CCGTCGCCGC CCCGCCTATA
TCAATGCTAT ATCAATTTCT TGATGCAACC CCGCAGAGCC CGGACCGTGG GGCAAACGCG
GCGCGGGGGG AGTTTGAGAA ATGGCAGGTC CCACAGCTCA CCCCCGGCGC GGTTCAGATG
GAGAGCATTA TCTGCTGGCT CCGCGATAAC GCGAGCTCCG ACACGATCAT CACCAATGGC
GCGGGGAACT ACGCCGCCTT CCTGCATCGT TATTACCGGT TCCGTCAGTA CGGGACGCAG
GTGGCGCCAA CATCCGGCTC CATGGGTTAC GGTCTGCCCG CGGCCGTATC CGCCAAATTG
CACAATCCCG ACCAGCCGGT GATCTGCCTG GCGGGTGACG GATGTTTGCA GATGACAATT
CAGGAGCTGT CGACCGCGCG GCAGCACGGG GCGGATATCA TCGTGATCGT CGCCAATAAC
GGGCGCTATG GGACGATCCG CATGCATCAG GAAAACCACT ATCCGGGGCG TGTGTCAGGG
ACGGATTTGT TCAACCCCGA TTACGCCGCT TTGGCCGAGG CCTATGGGGG CACCGGGCAT
CTGGTGACAG AGAATGCTCA ATTCGCAGAC GCCTATCGGC AAGCCCTGAC GGGCGGCTTG
CACATCATCG AACTGGCGCT TGATCCGAAG ATGCTGGCCA CCACCAAAAG TCTCTAA
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| Protein sequence | MTKHHGGKIL ADRLALHGVE RVFSVPGESF LAALDGLYDH DIPNIVCRQE GGAAMMAEAH
GKMTGTPGVL FVTRGPGATN ASAGLHIAMH DATPLVCFVG QIPLKHRDRG VFQEVDYRAF
FGPLVKWSAE VERTDRLAEY IDRAFAVAQA GRPGPVVLAL PEDILCAMAE PPKQRPGARA
MGRVHPDDIA PMVEAFKLAK RPLILCGGPH WGDVEKQTAQ ALAERTGAPI AVTFRRQDYI
DNDHPNYAGD LGVGANPALQ KRLGDADCVL LLGAELNDIT TADFTLIDPA DPPTILQVAP
TPEATSKTYP ATLAVAAPPI SMLYQFLDAT PQSPDRGANA ARGEFEKWQV PQLTPGAVQM
ESIICWLRDN ASSDTIITNG AGNYAAFLHR YYRFRQYGTQ VAPTSGSMGY GLPAAVSAKL
HNPDQPVICL AGDGCLQMTI QELSTARQHG ADIIVIVANN GRYGTIRMHQ ENHYPGRVSG
TDLFNPDYAA LAEAYGGTGH LVTENAQFAD AYRQALTGGL HIIELALDPK MLATTKSL
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