| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0115 |
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| Symbol | |
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| ID | 3932551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 105076 |
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| End bp | 106431 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637902456 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_508057 |
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| Protein GI | 89052606 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCGCA TATTCGGCTT GCGCAATGGC GCAGGCGCGA AAGGATACGA ATTGTTCGAT
TTCGACATGC TCGGCCTGAA GCCGATCCTT GCAAAGACCC TCAAGACTGC CGGGTTCTCT
GAACCCACCC CGATCCAGAA CCAGGCGATC CCGCTGGCCC TCGACGGCCA CGATATCATG
GGCCTCGCCC AAACCGGCAC CGGAAAGACG CTGGCGTTTG GCCTGCCGCT GTTGGAGCAT
CTGCTGTCCC TGCATGGCAA GCCGGAGCCG AAGACGGCGC GCGCCCTGAT CCTCGCTCCG
ACCCGTGAGC TGGTGAACCA GATCGCCGAC AGCCTGCGTG TGTTCACCCA GAACACGCCC
GTGAAGATCG CCACCGTTGT GGGCGGGCAA AGCATTGGCC GCCAGATCTC CACCCTGTCG
CGCGGCACCG ATATCCTTGT GGCGACGCCC GGTCGCCTGA TGGACCTGAT GGACCGTCGC
GCGATTGATC TTTCCACCGT GAAGCACCTT GTGTTGGACG AGGCCGACCA GATGCTGGAT
CTCGGCTTCA TCCACGCGTT GCGCAAGATT GCGCCCGCCT TGGGCACGCC GCGTCAGACC
ATGCTGTTCT CGGCCACCAT GCCGAAGCAG ATGGAAGAAC TGGCCTCCGC CTACCTCTCC
AATCCCAAGA AAGTGCAGGT CTCCCCTCCC GGAAAGGCGG CGGACAAGGT CACGCAGGTG
GTGCATTTCA TGCCGAAGCC CGCAAAACCT GCCAAACTGC GGGAGGTCCT GAATGAGGAC
CCCGATGCGC TGGTCCTCGT CTTTGGCCGC ACCAAGCATG GCTGCGAGAA ACTGATGAAA
GGCCTTGTGG CCGACGGCTA CAACGCCGCT TCGATCCACG GCAACAAGTC TCAGGGTCAG
CGCGACCGCG CGATCAAGGC GTTCCGGGAC GGCACGATCA AGATCCTGGT CGCGACCGAC
GTGGCCGCCC GTGGCATCGA CATCCCCGGC GTCGCGTATG TCATCAACTA TGAACTGCCC
GACACGCCCG ACAATTACGT GCACCGCATT GGCCGGACGG CGCGGGCCGG TCGTGAGGGC
GAAGCGATTG CGTTTTGCTC CGCCGAAGAA GTCGATCTGC TCGTCCAGAT CGAGAAGGTC
ATGAAGATGT CCATCCCCGT GGCCTCCGGC ACGCGGCCCG AGGCGGTGAA GGCCGAAAAG
CCCCAGCGCG GCGGACGGCG TCGTGGCGGC GGCGGTGGCG GGCGTCCCGG TGGCGGGGGC
GGCGGCAACC GTAAGCCCCA GGGCAAAGGC GGTGGTGGCG GTGGCAACGG CCAGCCGCGA
AAACCCCGTC GGCCTCGCCG GTCCAAAGCG GCCTAA
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| Protein sequence | MWRIFGLRNG AGAKGYELFD FDMLGLKPIL AKTLKTAGFS EPTPIQNQAI PLALDGHDIM
GLAQTGTGKT LAFGLPLLEH LLSLHGKPEP KTARALILAP TRELVNQIAD SLRVFTQNTP
VKIATVVGGQ SIGRQISTLS RGTDILVATP GRLMDLMDRR AIDLSTVKHL VLDEADQMLD
LGFIHALRKI APALGTPRQT MLFSATMPKQ MEELASAYLS NPKKVQVSPP GKAADKVTQV
VHFMPKPAKP AKLREVLNED PDALVLVFGR TKHGCEKLMK GLVADGYNAA SIHGNKSQGQ
RDRAIKAFRD GTIKILVATD VAARGIDIPG VAYVINYELP DTPDNYVHRI GRTARAGREG
EAIAFCSAEE VDLLVQIEKV MKMSIPVASG TRPEAVKAEK PQRGGRRRGG GGGGRPGGGG
GGNRKPQGKG GGGGGNGQPR KPRRPRRSKA A
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