Gene Jann_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0093 
Symbol 
ID3932529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp87640 
End bp88149 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID637902434 
ProductMarR family transcriptional regulator 
Protein accessionYP_508035 
Protein GI89052584 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.560358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGC GCGCCACCGG GATGGGCCGA GGGGACACGT TGCTGTTCCT GACCGATGAG 
CAGTTACGCC GCGGGATCGA GGCGATGTTC TTTGCGTATC GCGGCTTTAC CGCTGACCCC
GATTTGATCC TGAGCGACCG GGGATATGGC CGCGCCCATC ACCGCGCCGT TCACTTCATC
AGCCGCACGC CGGGGACCAC GGTCAACAAC CTCCTCTCGA TCCTTGGAGT GACCAAGCAA
TCGCTCAACC GCGTGCTGCG GACGTTGGTG GAGGACGGGC TGGTGGAGGC CCGTGTGGGC
ACCCGAGACA AACGCGAACG GCATCTGCAC CTGACCCCCG ATGGCGTCGC GCTGGAACGC
GCCCTGTCGG AGGCACAGCG CAACCGGATG CGGACGGCGT TTCGCAATGC CGGGCCAGAT
GCGGTGTCGG GATTCCGCGC CGTTCTGGAA GAGATGATGG ACCCCGACAT GCGCCGCCAC
TACCTTGAAG GTGTGGAGCA AAACCAATGA
 
Protein sequence
MGERATGMGR GDTLLFLTDE QLRRGIEAMF FAYRGFTADP DLILSDRGYG RAHHRAVHFI 
SRTPGTTVNN LLSILGVTKQ SLNRVLRTLV EDGLVEARVG TRDKRERHLH LTPDGVALER
ALSEAQRNRM RTAFRNAGPD AVSGFRAVLE EMMDPDMRRH YLEGVEQNQ