Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0015 |
Symbol | |
ID | 3932451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 13929 |
End bp | 14792 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637902356 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_507957 |
Protein GI | 89052506 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAACCCG TCACCATCCT GTTTCAACAA CTGCGCGAAA TTGCCCGTGC AGGTATCGAG TTATTGCCGC AAATCGCCGT GGCCATTGTT GTCCTGCTGC TGACCTGGGC GGTCGCTGCG GGCGTCAAGG CGGTGATCGG GAGAACACTG AAAAGGTCGA AGCTGCGCCC CAGCCTGAAA GAACTGTTTG TCCTGTTCTC CTCCATCTTC GTTTGGGTGA TGGGGCTGAT GATCGCCGCC GTTATCGTGT TTCCGAACCT CACCCCCTCC AGCATCCTTG CGGGTCTGGG CATTGGGTCC GTGGCCATCG GGTTTGCGTT CAAGGATGTG TTTGAGAATT TTCTCGCCGG GATCCTGATC CTGTCCCGTC GCAAGATGCG GATCGGGGAC CACGTGGAAT GCGAAGGGAT TGAGGGCGAA GTGAAGAAAA TCGCCATCCG CGAAACGCAT ATCCTGCAAA CAGATGGTCA GTTGGTGATC GTGCCGAACG CCTTGCTGTT CAAGAATCCC CTCACCATCC GCACCGATCA GGACATCCGC CGCGTGACCG TGATTTGCGG CGTGGCTTAC GGAGAGGATG TGGACGCCGC ACGCGACGTG ATCCACGAGG CCGTCGCCGG TTGCGATACC GTTCGCCAAT CCGACAAGCC CATCCAGATT TTCGCGCAGG AGTTCAATTC ATCCTCGATC GATTTTGAGG TGACGTGGTG GACCGGGTCA ACGCCATTGG ACGTGCGCCG TTCGCGCGAT CAGGTCGTGG CAGGTGTGAA ACGCGCACTT GATGATGCCG GGATCGAGAT CCCGTTCCCG TACCGCACCC TGACGTTCAA GGAGCCGCTG CCCATTGCAC AGCCGGAGGG TTAG
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Protein sequence | MEPVTILFQQ LREIARAGIE LLPQIAVAIV VLLLTWAVAA GVKAVIGRTL KRSKLRPSLK ELFVLFSSIF VWVMGLMIAA VIVFPNLTPS SILAGLGIGS VAIGFAFKDV FENFLAGILI LSRRKMRIGD HVECEGIEGE VKKIAIRETH ILQTDGQLVI VPNALLFKNP LTIRTDQDIR RVTVICGVAY GEDVDAARDV IHEAVAGCDT VRQSDKPIQI FAQEFNSSSI DFEVTWWTGS TPLDVRRSRD QVVAGVKRAL DDAGIEIPFP YRTLTFKEPL PIAQPEG
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