| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0010 |
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| Symbol | |
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| ID | 3932446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 10410 |
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| End bp | 11687 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902351 |
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| Product | hypothetical protein |
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| Protein accession | YP_507952 |
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| Protein GI | 89052501 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | [TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTCT TCCTGACCCT GACCAATGCC AATATCCTCG ACCCCGCCTT CTGGGCAGCG
CAGGTCGTCG ACGGAAACAG CACAATCAAC GCCACAGCGG TCAGCGACAC GTTGCAGATC
ACGCTGACGG GTGGGTCGAT CACGATCACG GACACGACGA CCAGCGTTTC CACCACATTC
ACCAACGCGG ATTTAAGCGG GGGGGCCTTC AGCAACGTCG TGCAATTTCG CGGGAACGAC
GCTGACAACA TTATCGGCGG CTCGGTGGGG CTAAACGGAC AGGGATATCG CGGCGGCAGC
GGGGACGATC AGCTTACCGA TGACGGCAAT CTCGGCGGTC AGATGCGCGG CGGGCGCGGC
GACGATACCA TCATCGGCGG AACCGGCGAC AATCAGATCC GAGGCAATGG CGGCGATGAC
CTGCTTATCG GTGGTTCAGG CAACAATAAC CTGATTGGCG GCAGTGGCGA CGATACGCTG
ATCGGCGATC AGGGGTCCGG CAACCTGATT GGTGGATCGG GGGACGACCT GATTATCACG
TCCGAGTTGA CGACATTCGT GGATGGCGGC AGCGGCGACA ACCAGATGAT CATTCCCGAA
AACGCAACGT TCACACCCTT TTCTCCTGGC TCCACCGGGG GCGAGGTGAC CGTAACCTTT
CCCGATATGT CCACGAGAAC CTTCACGTAT CTCAACATCG CGGCTGAAAA TATCACGACG
ATCTGCTTCG CTGCCGGCAC CCGGATCGCG ACGCCACGCG GGCAGGTCGC GGTGGAGGAT
TTGCGCGTGG GCGACAGGGT CGTCACGCGC GACGGCGGCA TTCAAGCTTT GCGCTGGATC
GGTTTTCGGA CCGTACCCGC CGACGGCCCG CTGGCGCCCA TCCACATCAC CAAAGGGGCC
CTTGGCAATA CCCGCGCCCT GACCGTGTCG CCGGAACACC GGATGCTGGT TCAAGGCTGG
CGCTGTCAGG TGCTGTTCGG CCGAGAGGAG GGGCTGTGCG CCGCAAAGCA CCTGGTGGAC
GGGGACAGCA TCTACCGCGA TCCGCGCGAG TTGGTGACCT ATTTCCACGT GATGTTTGAT
GCCCACCAGA TCATCCTGGC CGAGGGGACC TGGGCGGAGA GCCTTTATAT TGGCGACTAT
CAAACCGCCC ATGATCCCGA GCTGTACGCC GAGCTGTTCA CCCTCTTCCC CGAGCTTGAG
GATACCGCGC ACCCCGCGCG CCTTCTGGCG GCAGAGCCCC TTCGCGCGTT TGAGGCCACG
GCCCTTCGGG ACGCTTAA
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| Protein sequence | MPVFLTLTNA NILDPAFWAA QVVDGNSTIN ATAVSDTLQI TLTGGSITIT DTTTSVSTTF
TNADLSGGAF SNVVQFRGND ADNIIGGSVG LNGQGYRGGS GDDQLTDDGN LGGQMRGGRG
DDTIIGGTGD NQIRGNGGDD LLIGGSGNNN LIGGSGDDTL IGDQGSGNLI GGSGDDLIIT
SELTTFVDGG SGDNQMIIPE NATFTPFSPG STGGEVTVTF PDMSTRTFTY LNIAAENITT
ICFAAGTRIA TPRGQVAVED LRVGDRVVTR DGGIQALRWI GFRTVPADGP LAPIHITKGA
LGNTRALTVS PEHRMLVQGW RCQVLFGREE GLCAAKHLVD GDSIYRDPRE LVTYFHVMFD
AHQIILAEGT WAESLYIGDY QTAHDPELYA ELFTLFPELE DTAHPARLLA AEPLRAFEAT
ALRDA
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