Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0003 |
Symbol | recF |
ID | 3932439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2749 |
End bp | 3876 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637902344 |
Product | recombination protein F |
Protein accession | YP_507945 |
Protein GI | 89052494 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGGC AAAATGATGA GGGCTGTGGG GTGAGCAAAG TGTTCGTCTC ATCCCTGGCG CTGTCGCATT TCCGCTCCCA CAGACGGGCG CGAATGGAGT TGGACGGGCG CCCAGTGGCG CTGTTCGGAC CCAATGGCGC GGGCAAGACC AATCTGATGG AAGCTGTCTC CTTGCTGTCG CCCGGGCGTG GGTTGCGGCG CGCGGCAGCC GAAGAGATCA TTCGCAGGCC TGAGGCGATT GGCTGGAAAG TCAGCGCCGA GATTTCCGGG CCCAGCATTA ACCACGATAT CACTCTGACA GCCGAACCCG GACAACCCCG CACCACTCAG GTCGACGGCA AGACCGCACC ACAGATCGCG CTTGCCAGGC TGCTGCGCAT TGTCTGGCTG GTGCCGTCTC AAGACAGGCT CTGGAGCGAA GGGGCAGAAG GGCGGCGGCG GTTTCTTGAC CGGATCACGC TAAGTTTTCT GCCCGACCAC GCAGATGCCG TCCTGACCTA CGAGAAAGCG ATGCGCGAGA GGAACCGTCT GCTCCGCGAC GATGCGCGTG ATCCGGCGTG GTATCGCGCG TTGGAGGCGC AGATGGCAGA CGCCGCTGTG CGGATCGTGA ACGGGCGCGA CGACGCGCTC ACCCGCATCA GCGCTGCCCA GAATGGGGCT GCGACAGCTT TCCCCGCCGC CGATCTGGGG ATCGAAACGG AGCACCCCTG CCAAACGGTC GACGATTTCA TCCAGGCCTT CGAGGGGAGC CGCCCACGGG ACCTCGCAGC CGGGCGCACG CTGATCGGAC CGCACCGCGC CGACATGTCC GCGATCTACC GCGACAAGGG TGTGCCCGCC AAACAATGCT CCACCGGTGA GCAGAAAGCG CTGCTGATCT CGCTGATCCT GTCCAACGCA CGGGCCTTGA AGGCCGAGAC CGGAACGGCC CCCTTGGTGC TGCTGGATGA GGTCGCGGCG CATCTGGATG CGGGGCGTCG CGCAGCGCTG TTTGATGAGA TCTGCGCGTT GGAGGCTCAG GCCTGGATGA CCGGAACAGG GCCGGAATTG TTCGCGGAAT TGGGTGACAG GGCGCAGCAT TTCGAGATTA CCGAGGTCGC AGGCGAAAGC CAGGTCGCCG CCCCCTAA
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Protein sequence | MSRQNDEGCG VSKVFVSSLA LSHFRSHRRA RMELDGRPVA LFGPNGAGKT NLMEAVSLLS PGRGLRRAAA EEIIRRPEAI GWKVSAEISG PSINHDITLT AEPGQPRTTQ VDGKTAPQIA LARLLRIVWL VPSQDRLWSE GAEGRRRFLD RITLSFLPDH ADAVLTYEKA MRERNRLLRD DARDPAWYRA LEAQMADAAV RIVNGRDDAL TRISAAQNGA ATAFPAADLG IETEHPCQTV DDFIQAFEGS RPRDLAAGRT LIGPHRADMS AIYRDKGVPA KQCSTGEQKA LLISLILSNA RALKAETGTA PLVLLDEVAA HLDAGRRAAL FDEICALEAQ AWMTGTGPEL FAELGDRAQH FEITEVAGES QVAAP
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