| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4277 |
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| Symbol | |
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| ID | 3932429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007801 |
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| Strand | - |
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| Start bp | 73289 |
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| End bp | 74368 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637902334 |
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| Product | lipopolysaccharide biosynthesis protein-like |
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| Protein accession | YP_512217 |
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| Protein GI | 89057763 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.52167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCCG CCTGGAAGAT CAAGCGCGAG CTGAAGCGCT TCGTCATGCA GATGGGCTAT
CTGCCGTGGA TGCTCGCCGC GCCCCGCGCC AAGCGCGCCT ATGACGCCCG CAAAGCGGCG
CAGATCCGCC TCACCCAGGG GGTGGCACCG CGCACGTCCG AATTGGCGGT GCTGCTTCTC
TTTCAGCCCA GGGGGATCAC GGCCTCCACT CTACACACGC TGGAGCATCT CAAAGCCCAC
GGCGTCTCCA CCCTCGTGGT ATCGAACGCG CCCCTCTCCG ATACGGATCG CGCCAGCCTT
GCCACCCACG CCTGGCTGAT CATGGAGCGG CCTAATTATG GCTATGACTT CGGCGGCTAC
CGCGATGCCA TTTTGCATAT TCTGGAAGAC GACCGGCCCC CTGCCCGTCT GTTTGTGCTC
AACGACAGCA TCTGGTTCCC GCTTCAGCCA GACAGCGACC TGATTGAGGA CGCGCGTGCC
AGTGACACCG ATCTATATGG ATTCGTACTC AACGACCGGA TGCGCGGGGC GCACCGGGCG
CATCTGCAAT CCTACTTCTT CAGCTTCGGT CCCCGCGCCG TGGCCAGCCC TGCGTTTGCG
GCCTATTGGC GTGATCTGTT CCTGACCAAC AACAAGAACC TGGTGGTGCG CCGCTGTGAG
ATCCCGATGA CCGGGGCATT CCGAACCTTG GGCTTTTCCG TGGCCGCGCG ACACCGCTAC
AGCGACGGGG CACAGGCGCT AAAAGCGTTG GACAATGCCA CCTTGGCCCG GGTGATCGCC
TATCAGGTCC AGGTCGATAC CCGCAACGCG CCCCGGCTGA AACCGCACCT GACGGAGGGG
CCGCGGGACG CAGCCTGGCG CGCCCGCGTG GATGCCGATA TCGATGCGGG CCTGTTGGAC
AAATATTTCC TGATCGCCCA CCCGGCGGTT CTGATCGGAC AGTTGCGCGT GCCGCTTCTG
AAGAAGGACC ATCAGTCGAT CTACCAGCTG CAGCGCCGGG AGCTGTTCGC AGGGGGCTAT
GACACAGGCT TTGCGCCCCG CGTCCGGGAC GAGATCCGCA GTTGGGACAG CCCGGATTGA
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| Protein sequence | MIPAWKIKRE LKRFVMQMGY LPWMLAAPRA KRAYDARKAA QIRLTQGVAP RTSELAVLLL
FQPRGITAST LHTLEHLKAH GVSTLVVSNA PLSDTDRASL ATHAWLIMER PNYGYDFGGY
RDAILHILED DRPPARLFVL NDSIWFPLQP DSDLIEDARA SDTDLYGFVL NDRMRGAHRA
HLQSYFFSFG PRAVASPAFA AYWRDLFLTN NKNLVVRRCE IPMTGAFRTL GFSVAARHRY
SDGAQALKAL DNATLARVIA YQVQVDTRNA PRLKPHLTEG PRDAAWRARV DADIDAGLLD
KYFLIAHPAV LIGQLRVPLL KKDHQSIYQL QRRELFAGGY DTGFAPRVRD EIRSWDSPD
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