| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4236 |
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| Symbol | |
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| ID | 3932388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007801 |
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| Strand | - |
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| Start bp | 22053 |
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| End bp | 24527 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637902293 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_512176 |
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| Protein GI | 89057722 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.707034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGCT CCCTCGTCAC TCGTTTTTGC CTCGTCTTGG TTGTGATCCT TGGTTTGGCT
GCTTGCCAAT CCTCTGAGGA GCGTGCGGAA GAGCACTATC AGAACGCTCT CAACCTGATC
GAAGAGGGAG ATTTTGAACG CGCGGGCGTA GAATTCCGCA ATGTGTTTCA GAACAACGGC
CAGCACCGCG ATGCCCGTGC GCGTTTTGCG CAGCTGCTGC GCGAAACCGA TGATATGCAA
GGGTCGTACA GTCAATATCT GAGGCTTGTA GAGCAATATC CGGGCGACGT TGAAGGTCGT
ATTGCCCTCG CCGAGATGGC GATCGATCTG CAGAACTGGG AAGAGGCAAG ACGCCATGGT
ATCCGGGCGC GGGAATTGGC CTCCGACGAT CCGCGCGTTA TGCCGATTGG CATCAACCTC
GATTACGCGG ATTCGATTGA GGCTGAAGAT GAGCCAGCGC GGCGTTTGGT CGTGGATGCT
GCACGGCAAT ATCTTGACGA GGCCCCCGAA AATGTGAGCC TGCGCCGGAT CGTGATAGAT
GCCGCTTTGC GCGATGGAGA GCTTGAAGCT GCCTTGACGG AAGTGGACGC AGCGCTCGAG
ATCGCTCCAA CAGACCGGCA ATTGTACGAT GGCAAGCTTC AGATCCTAGC GCAGCTTGAG
CGGGCGGATG AAATAGAGGC TCTGTTGGAA AACATGGTCG ACCTCTTCCC GGAGGATGAA
GACCTTCCGG GAACTTTGTT GCGGTTTTAT GCTCTGCAGG GTGACATGGA GGCCGCGCAA
AGTTTTCTAA CCAACATCGT TGCGACCACT GATAGCGATC TTCAGCGCCG CAGTGCCCGC
AGTGCTCTGG TGCAACTCGC TTTGCAGGTC GATGGCCCAG GCGCCGCCCT TGCCGAATTG
GACCGAATTA TTGCCGAAAC TGACGACGAC CTGAGCTTCC GCACGTTGCG GGCCGGGATT
CGGTTCGATC AGGGTGAGCA AAGTGAGGCA ATTGCCGATC TTGAAACCTT GCTGGAAGGG
CAGGAGTCCG GAGAAGAAGT CAATGTGATC CGTGTGACCT TGGCCCGAAT GCTGACCACA
ACGGGCAATG TCGTCGGCGC CCGTGCTTTG GTGGAAGAGA TCCTAGTCGC TGATCCGAGC
CAGGCAGATG CTCTCAAGAT GAAGGCGGCA TGGCTTATCG AAGAGGACAA TGGCGATGAG
GCGATCGCTC TCTTGCGGAC CGCGCTTGAC CAAGACCCGA ACGATTCCGT GGCGTTGTTG
CTGTCAGCAG ACGCACATGC CCGCAACGGA GACCACAGCC TGGCTCGTGA ATTCCTTTCG
CTGGCTGTGG ATGTTTCGGA TGCCGGCCTT GAGGAATCGC TTCGCTATGC CCGCAACCTC
ATAGGCGATG AGAGGTTCCT GCCCGCTGAA GAAGTGCTGA TCAACGCCCT GAGGGCCTCC
CCGGGAGAGC TGCAGTTGCT GTCGGAACTG GGGCAGCTCT ACATCTCCAT GGAAGATTGG
CAGCGCGCAG TGCAGGTCGA GAACACCCTG CGAAACCAGG ATAATGAGCA GGCGACGAAT
ATTGCCAATG TGCTTCAGGT GAGGCGTCTG AGCGCGGAGG ATGGAATGGA TGATGCCATC
GTATTCCTCG AAGCTCTGGA TGAAGAGGCG CAAGACGGGG ATTTTATGGC CCGCCTCACA
TTGATCCGCG CGCAGCTGGC CAATGGGAAT GCCGATGCAG CGGTTGCGTT GGCCGAGGAG
GTGTTCAATG ACGATCCCGA GAACCTCGAG CGCCGCTATT TACTGGCGGC CACTCAAGCC
GGTGCCGGGC AGTTTGACCA AGCCCGCGCC AACTACGAAA TCATAACGAC CCAGGTGCCC
GAGTTTGAGC AGGCCTGGAT CGGCTTGGTC CGCCTGCTTA GCCGCATGGG CGAACGCGAG
GCGATCAATG ACACGCTTCA GGCGGCTCTC GACGTTCTTC CCGACGGGAT GAATTTGCTA
TGGGCGCAGG CGTCCTTGTT CGAGCAACGC GCCAATTTCG AGGGTGCGAT CGCGATCTAT
GAGCAATTGT ACGAGCGCGC CCCGAACGAG CCCGTGATCG CCAACAACCT GGCCAGTATG
ATCAGCACCT ACCGTGATGA CGACGAAAGC CTCGAGCGGG CTTATGCCGT CGCGCGCCGT
TTGCGTGGTG TGGAATTCGC ACCGTACCAA GACACCTATG GCTGGATCGC TTACCGCAGG
GGTGAATATC AGGAAGCGCT GGATCATTTG GAGCCCGCGG CCGCCGCACT GGCTGAAGAG
CCGCTTGTAC AATTCCATCT CGGTATGGCC TATGCGGCCG TGGAGCGGAA TGAAGAGGCG
CTGGAGCAAC TTCGCCGTGC CGTCGAGCTG GCCGGACCCG AGGATGGTCG GACACAGTTC
GACACTGCGC GCGCCGAGAT TGAGCGGTTG GAAGCTGTGG AAAATGGCGC GGGCAGCGAA
GGCGCCGATC AGTGA
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| Protein sequence | MSGSLVTRFC LVLVVILGLA ACQSSEERAE EHYQNALNLI EEGDFERAGV EFRNVFQNNG
QHRDARARFA QLLRETDDMQ GSYSQYLRLV EQYPGDVEGR IALAEMAIDL QNWEEARRHG
IRARELASDD PRVMPIGINL DYADSIEAED EPARRLVVDA ARQYLDEAPE NVSLRRIVID
AALRDGELEA ALTEVDAALE IAPTDRQLYD GKLQILAQLE RADEIEALLE NMVDLFPEDE
DLPGTLLRFY ALQGDMEAAQ SFLTNIVATT DSDLQRRSAR SALVQLALQV DGPGAALAEL
DRIIAETDDD LSFRTLRAGI RFDQGEQSEA IADLETLLEG QESGEEVNVI RVTLARMLTT
TGNVVGARAL VEEILVADPS QADALKMKAA WLIEEDNGDE AIALLRTALD QDPNDSVALL
LSADAHARNG DHSLAREFLS LAVDVSDAGL EESLRYARNL IGDERFLPAE EVLINALRAS
PGELQLLSEL GQLYISMEDW QRAVQVENTL RNQDNEQATN IANVLQVRRL SAEDGMDDAI
VFLEALDEEA QDGDFMARLT LIRAQLANGN ADAAVALAEE VFNDDPENLE RRYLLAATQA
GAGQFDQARA NYEIITTQVP EFEQAWIGLV RLLSRMGERE AINDTLQAAL DVLPDGMNLL
WAQASLFEQR ANFEGAIAIY EQLYERAPNE PVIANNLASM ISTYRDDDES LERAYAVARR
LRGVEFAPYQ DTYGWIAYRR GEYQEALDHL EPAAAALAEE PLVQFHLGMA YAAVERNEEA
LEQLRRAVEL AGPEDGRTQF DTARAEIERL EAVENGAGSE GADQ
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