| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4235 |
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| Symbol | |
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| ID | 3932387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007801 |
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| Strand | - |
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| Start bp | 21299 |
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| End bp | 21916 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902292 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_512175 |
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| Protein GI | 89057721 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.694304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACACC TCTTCCTCGC ACTTTTAGGC GTCTGGATCG GGTTTGCGGC TTCGGCACAG
ACTGGATACC GAATAAACCC TGGCGACGTG CTAGCGGTTG AAGTGGTGGA GGATGCGTCC
CTCAACCGCG AGGTACTCGT GCTGCCCGAT GGCAGCTTCA ACTTCCCCTT CGCTGGCACC
GTTCAGGCCC GTGGTCTGAC CGTGGAGCAG GTGCAGTCTG CCGTCACGCA GGGGATTTCT
TCCAACTTCG CCGCACCCCC GAATGTCTTC GTCACAGTGC GTCAGGTGCA GCCCGCTGCT
CCACGTGCCA CCGGGGGAGG GCGGCCGGCC TCTCCACGGA CGATCGAGAT CTATTTCCTT
GGCGAGGTCA ACAATATCGG CCCCGCTGAT ATCCCACCGG GTACAACCCT GCTGCAGGCG
CTGTCGCGCG CAGGGGGATT CACCAACTTC GCGGCTCTTC GCCGGATTCA GCTACGCCGC
ACGGACCCGG CCACGGGTGC GCAATACGTG TCCGAAATCG ACTACCGTGC GATTTCCAAC
GGCGCGCGTC TGTCGACCGA TATCACCCTT TATGACGGGG ATGTCATTCT GGTTCCGGAG
CGGCGGCTGT TCGAATAG
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| Protein sequence | MKHLFLALLG VWIGFAASAQ TGYRINPGDV LAVEVVEDAS LNREVLVLPD GSFNFPFAGT
VQARGLTVEQ VQSAVTQGIS SNFAAPPNVF VTVRQVQPAA PRATGGGRPA SPRTIEIYFL
GEVNNIGPAD IPPGTTLLQA LSRAGGFTNF AALRRIQLRR TDPATGAQYV SEIDYRAISN
GARLSTDITL YDGDVILVPE RRLFE
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