| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4231 |
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| Symbol | |
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| ID | 3932383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007801 |
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| Strand | + |
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| Start bp | 16370 |
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| End bp | 18079 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637902288 |
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| Product | glucose sorbosone dehydrogenase |
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| Protein accession | YP_512171 |
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| Protein GI | 89057717 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.496798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCGAT TATTTAGCCG TTTAACGGTG CGCCTGCTGA TCATTTTGGC CATTTTCGCC
GGGGGCGTCT ATGCTGGCAT GCAAGTCGTA TGGCAGCTCA ACCAGCAGTT TTCCCTGTTG
TCACGCATCG AGGACAAAGT CTCGATGTAC CTGAACTCCT ATCTGCGATC GGGTGAACAA
ACCGATCAGG TGATCTTAAC CAACAGACTG CGGCTTGATG CGCGCACCGT TTTTCTGCCA
TCACAAACAG CGGATTACGC TGGCGGGATC GATGCGGTGA ACCAAGGGCA AGTCGTCTTG
CTCGACCGGC TTGGATCGTT TTTTCTAGTC TCTCCTGATA CTGTGTCTGA GATTGCCATC
GAAGCGCCGG AAAATGGCTT GGATGCTTTG CGCGCACAGC TTGCGGCGGG TGAACTTGGA
AATGCGACAG TCGAGTTCAA ATGGTTTCGC TTCAACGATA TCCTCGTGGC GCGCAACGGC
GAAACGGACA TGCTGCTGGT GTCCTATACG GAATGGCACC CTGAAAGACG GTGCTTCACC
TCGACCCTAT CGGGATATCA GATCGCACAT GACGTAGTCT GGCAAGATCT GTCTGTCACG
CAGGACGATT GGCGCGTTGT CGCTCGCACG GAACCCTGCC TCGATCCCCT CCCTGACGGC
GAAGCAATCT TTGGCCTTGA GGCGGGGGGG CGGCTTGCCC AACAGCCCGG TGAATCGAGC
AGTGTCTTCT GGACAACCGG CCAATACGAG CGCGGAGACT CTTTTTCAGG TACGAATTTC
GATACCGCAG CCCTGGGGAT GCGTGATGGA TCCCATTACG GACGTGTGCT CAACGTTTCG
CTGGAAGATG GCTCCATCGT CGAACTTGCA CGCGGCCTGC GGAATCCGCA GGGATTGGAT
GTCGAACCGA ACGGAAATAT CTGGGTCACG GATCATGGTG CGGCAGGAGG CGATGAACTT
AACCTGATTA CCGAACCCGG TCGGAATTTC GGCTTTCCCG CCGTCTCATA TGGACGCCAC
TACAACGGTC AGCCGATCGG CAATCTTGGC CGCCACGGAG GTCATGGAAC ATATGACCTG
CCCGCTTTCG CCTTCGTGCC CTCCGTGGCG CCGTCAGCAG CACTGGTGAT GTCTGGTTTT
CATCCTGTCT GGGATGGCGA TATCATTGTC GGAGCGTTTT CACAGCGGAT ATTCCGTGTC
CATGTTGTCG ATGGCCGCGG CATATTCGCG GAACCTATAG ATCTAGGCGT TCGAACACGC
GACATGGCCA TGACAAGCGA CGGGCAGATC GCTATCTGGA CAGACGACTT ACGGATGATC
TTCGTGCGTC CGTCAGAGGC ACCAAGTGCA CGTGACCGAC TCGACTCCGA GCTCATGGCC
CTCGCATCGG ATACGGAAAC GATGGCCGCC TTGATGTCAC GGGTGAACAC CTGCGCTACG
TGCCATTCCC TGGAAGAGGA AGATCACAGG GCAGCACCCT CGCTGCACGG GGTCTGCGGC
CGAGCGGTCG GATCAACAGA CTTCGGGAGC TATTCCGAAA GTCTCGCCAC GATGCGAGGC
ACATGGGAAA CTGAGAGCCT GTCACAATAT ATCAACGCGC CAAGCGTCTT CGCGCCGGGA
ACAAGCATGG GTTATGGCGT GCAAGATGAA GACGTGTCCC GCATGATCGC AACGGCCCTG
TGCCAACTGC GCGAGGCCGA TGCACCTTAG
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| Protein sequence | MVRLFSRLTV RLLIILAIFA GGVYAGMQVV WQLNQQFSLL SRIEDKVSMY LNSYLRSGEQ
TDQVILTNRL RLDARTVFLP SQTADYAGGI DAVNQGQVVL LDRLGSFFLV SPDTVSEIAI
EAPENGLDAL RAQLAAGELG NATVEFKWFR FNDILVARNG ETDMLLVSYT EWHPERRCFT
STLSGYQIAH DVVWQDLSVT QDDWRVVART EPCLDPLPDG EAIFGLEAGG RLAQQPGESS
SVFWTTGQYE RGDSFSGTNF DTAALGMRDG SHYGRVLNVS LEDGSIVELA RGLRNPQGLD
VEPNGNIWVT DHGAAGGDEL NLITEPGRNF GFPAVSYGRH YNGQPIGNLG RHGGHGTYDL
PAFAFVPSVA PSAALVMSGF HPVWDGDIIV GAFSQRIFRV HVVDGRGIFA EPIDLGVRTR
DMAMTSDGQI AIWTDDLRMI FVRPSEAPSA RDRLDSELMA LASDTETMAA LMSRVNTCAT
CHSLEEEDHR AAPSLHGVCG RAVGSTDFGS YSESLATMRG TWETESLSQY INAPSVFAPG
TSMGYGVQDE DVSRMIATAL CQLREADAP
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