| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4230 |
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| Symbol | |
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| ID | 3932382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007801 |
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| Strand | + |
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| Start bp | 15281 |
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| End bp | 16321 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637902287 |
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| Product | IS30 family transposase |
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| Protein accession | YP_512170 |
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| Protein GI | 89057716 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.382634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGCT GCTACCCTCA CCTGAGTCTG GAAGACCGCC GAAAGATTGC GAAGTGGTAT
GATGCGAAGA TGCCTGTTGC AGAGATTGCG GATCGGCTTG GTCGTGCATC CTCAACGATC
TACCGCGAGC TGCGGCGGAA TACCTTTGCC GATCAAGAGC TTCCTGAGCT GAACGGTTAC
TACGCATTGA ACGCGCATAG CATGTATGAG AAGCGCCGTG CGGTTCATCG TAAGATGCTC
ATTCATCCAG ATCTCAAGGC CGCCATTGAG GATCGCCTCA GAGCTGGCTG GTCACCGGAA
CAGATCTCAG GCCGAATGAA ACTGGAGCAG CATCCAGTCA GGGTGAGTCA CGAGACCATC
TACCGCTTCG CATATTCCGA AGATGGCCGT GAGGAACAGT TCTACAGCCA TCTGCCAGAG
CATCGCAGGC GTCGCCGAAA GCGTGGTATG CGGCGCTATA AACGCACACA CATCTTGGAC
AGTCAGAGCC TATCTCAAAG GCCTGAATAC GTAGCCGAAC GTAGAGAATT CGGCCATTGG
GAGTGCGATC TAATGATGTT CCGCAGAGAA CATGGTAGGA TCAATGTGAC GTCGCTCGTT
GAGCGCGTCA GCCGCTTCAC GGTGGTCTCA CGCAACGAGG ATCGTCAATC CAAACCGATC
ATGGATGCGC TGATCGACGG CCTTGCTCCC CTGCCCGCCG ATGCACGGCA GTCCATCACA
TTCGACACTG GCACCGAGTT CTCAGCCTGG CAACGGCCCA AGAACGGGAT CGATGCCGAT
GCCTGGTTCT GTGGCCCGCA ATCGCCTGTC GGGCAATGTC TGGCAAAAGA GTACTGTCGA
AAACACCAAC AACAGGCATC GACGTTACTT ACCCCGCTTA ACCGCCCGGC CCGCCTTGAC
GGCGCTGGCA AATCGATTTT TGAAGTTAAT TTGCCACCGC ATCAACGCCA CGCTACGCAA
GTGTTCGGGC TATCGAACGC TTGCAGAAGT TTTCGAACGC AGCCTCATAG AAATACAGAA
CCACCTGAGG TAAAGCCATA A
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| Protein sequence | MGRCYPHLSL EDRRKIAKWY DAKMPVAEIA DRLGRASSTI YRELRRNTFA DQELPELNGY
YALNAHSMYE KRRAVHRKML IHPDLKAAIE DRLRAGWSPE QISGRMKLEQ HPVRVSHETI
YRFAYSEDGR EEQFYSHLPE HRRRRRKRGM RRYKRTHILD SQSLSQRPEY VAERREFGHW
ECDLMMFRRE HGRINVTSLV ERVSRFTVVS RNEDRQSKPI MDALIDGLAP LPADARQSIT
FDTGTEFSAW QRPKNGIDAD AWFCGPQSPV GQCLAKEYCR KHQQQASTLL TPLNRPARLD
GAGKSIFEVN LPPHQRHATQ VFGLSNACRS FRTQPHRNTE PPEVKP
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