| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4220 |
|---|
| Symbol | |
|---|
| ID | 3932372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007801 |
|---|
| Strand | + |
|---|
| Start bp | 7559 |
|---|
| End bp | 8539 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637902277 |
|---|
| Product | ParB-like nuclease |
|---|
| Protein accession | YP_512160 |
|---|
| Protein GI | 89057706 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5489] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.95609 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAG CTCACAAGAC CATCTCCGTC GCTATCGGCG CTCTCACACC GCATCCAGCG
AATGTGCGGG CTAATTCTTC TGAGACCTAT GACAGCGACA GCATCGCGCA CCTGAAGGCC
AGCATCGCCA TACTGGGTTT GATCCAGCCG CTGCTGGTTC AGAAACTAGA CGGCAAGTAC
GGCGTACTGG CCAGCGGGCG GCGTCATACG GCGCTCAACG AACTGGTTGC CGACAAAGCA
GCGAAGGGCT TTTCAAAGCG TACCAAGAGC GCCGACGATG CTACAACCGT CTGCTCCGGC
ATCATCCATA GTGCGAAATT CGACATCGCC ATCCAGCTGG AGCGCCGCGC CAAGATGTCC
GAGCGCAGCT CCGACTACGA CATCACGACT GTCAATAAGT CTGGTCGCAA GGTTGGGATC
GGCACGGCAT GGAACGAAAC CGGCCAGAAC ACTGGCAACC ACTACGTGTC TATGCAGATA
GATGTGAGCA TCAGGTCGTT TCGCGTGAAC GCTGTCCCGA CGCAGGAAGC GTGTGACGCC
GAAACCAGCG CATTCGACAT CATTTCGCTG GTCTCGAACG GCGTGATGAA ATTTGAATCG
ATCTTGGGCG AGCTGACCGC CATGGATGCC GATAACGCCT TCACCGGCTA CATCGCCAAC
ATGATGTTCG ATCTGGACTT CATGCTGATC GAGAACGGCT ACAAGACCGA AGAGAGCCAT
CCCGACTATC GCATCGAGAT CCGCTCCCTG CGTGGCACCC CGATCCGAGT CGGCTCCGCT
TGGATGGCGA AGAGTGCCAA GACCGGCAAC GAGTACCTGT CACTGCTGAT CAACACACCC
GATGGGGATC TGCGCGTGAA CGCCATCCAG AACGACGAAC AACGCGGAGG GCAGGCGTTC
TCTATCATCC CGTTCATCGA TAAGCTCGGA TCAACGGCAG TCAGTCAGCG AGGGACTTTC
GCTTGTGGCC TGACCGGCTA G
|
|---|
| Protein sequence | MTQAHKTISV AIGALTPHPA NVRANSSETY DSDSIAHLKA SIAILGLIQP LLVQKLDGKY
GVLASGRRHT ALNELVADKA AKGFSKRTKS ADDATTVCSG IIHSAKFDIA IQLERRAKMS
ERSSDYDITT VNKSGRKVGI GTAWNETGQN TGNHYVSMQI DVSIRSFRVN AVPTQEACDA
ETSAFDIISL VSNGVMKFES ILGELTAMDA DNAFTGYIAN MMFDLDFMLI ENGYKTEESH
PDYRIEIRSL RGTPIRVGSA WMAKSAKTGN EYLSLLINTP DGDLRVNAIQ NDEQRGGQAF
SIIPFIDKLG STAVSQRGTF ACGLTG
|
|---|
| |