Gene ECH_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_1054 
Symbolrnc 
ID3927257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand+ 
Start bp1082503 
End bp1083183 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content33% 
IMG OID637902168 
Productribonuclease III 
Protein accessionYP_507839 
Protein GI88658070 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0157951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAA GTATATCAAA AATCATAAAA TATAACTTTA AAAATCCCCA ATTATTAAAT 
GAGGCATTGA CACATCCTAG TCTAGTATCA AAAGATACCT TAAAATTTAA CTATGAAAGA 
CTAGAATTCC TAGGGGATGC AGTATTAAAC ATAGTAATAT CCGAAATGCT ATTCAATATT 
TTCCCTAAAG ATACAGAAGG TAACCTCGCT AAAAAGAAGA CAGCATTAGT TTGTGGCAAT 
AAGTTAGTAG AAGTTGCACA GTCTATAAAT CTCGGACAAT TTATCATGAT GTCAGATGGT 
GAAAGAGCGT GTGGTGGTAT AAATAATTTC CGTAATTTAG AAAATGCATT AGAAGCTTTA 
ATAGGTGCAA TATACCTTGA CGGAGGATTT ACAGCAGCAC AAGACTTTAT ATACTTATTT 
TGGGAACATT CTGCAACACA TATGAATGTC CCTCCACAAG ATGCAAAAAC TATACTGCAA 
GAATTGGTAC AAGGAAAAAG GTTACCAGCT CCTGCATATC ACACCATAGA TAAATCTGGA 
CCAGATCACA ACCCTACATT TACAGTAGAA GTAAGAATTC CATCATATCA AGCAATACAA 
GCAACTGGTC ATAATAAAAA ACTCGCTGAA CAAAAAGCAG CAAGTTTAAT GTTAAATCAA 
ATTCATAACA AAACAAAATG A
 
Protein sequence
MIESISKIIK YNFKNPQLLN EALTHPSLVS KDTLKFNYER LEFLGDAVLN IVISEMLFNI 
FPKDTEGNLA KKKTALVCGN KLVEVAQSIN LGQFIMMSDG ERACGGINNF RNLENALEAL 
IGAIYLDGGF TAAQDFIYLF WEHSATHMNV PPQDAKTILQ ELVQGKRLPA PAYHTIDKSG 
PDHNPTFTVE VRIPSYQAIQ ATGHNKKLAE QKAASLMLNQ IHNKTK