| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_1041 |
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| Symbol | virB4-2 |
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| ID | 3927466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | - |
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| Start bp | 1071112 |
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| End bp | 1073487 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637902155 |
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| Product | type IV secretion system protein VirB4 |
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| Protein accession | YP_507826 |
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| Protein GI | 88657785 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTTG TGAAAGAAAT GATCGGCCAT TCTTCTGATA TGAATAATTT TTCTAGAAAA
AGACGAGATA ATACCTCTAG TAAAGGAGAT TTTATTCCTG CAGCTTGTCA TTATGATGAG
AATACAATAT TGAATAAAGA TGGTGAACTT GTACAAATAA TAAAGATAGA GGATTATGTA
CTTACTCATT ATGTTAATGA TAAAGATTTA AGAACAGTAG TGCGTAATAG TATAGTTAAT
AGTGTTGAAG TTCCAGAAGT TTCTTTTTGG ATTTATACTG TAAGGAAACC ACATAAGTTT
GATTTTGCAA GAAAAAGTAT AAACGATGTT TCTGATGCTT TAGGTAGTGC TCATCTTAAT
AATATAGGTC AACGTGTGAC TTATATTAAT GAGTTATATA TAGCAGTGGT TACTAATCAC
TTACCTGAAA GTATGAAAGG AGTGTTAGGT GCTCTGTCAT TCTCCTATGT AAAAAATAAG
CATAAAGATT TTTTAAAAAA TAAAATAGAC AGATTAAATA AGGTCACTGC AAGTATTTTA
GAAAATTTGA AAAAGTTTGA AGTCAGAAAG TTAGGATTGA TAGTAATTGA TAAAGAAAAA
GTAAGATCGG AGTTGATAGA GTTTTTGTAT TATTTAACTA TGATGCATCA TAAAGAATGT
TTCCTTGATA TGGTAGATAT TTCTGGTATA TGTAGTCATT GTAGTATTAG TATGGGATTT
AATACATTTA AAATTTCATG TGATAATAAC CAAAGATTTG GTGCAATATT AGCAATTAAA
GATTATCAAG ATTCTCCATT AGATGCGGTA GATGAATGTC TACAGCAGGA TTATGGATTT
ATCGTAGTTG AAATTATAAA GTTTGCAAAA AGTAAGAATG CATTAAAGCT TTTTCAAAAG
CAAGCTACAT TTTTAGAATG TAGCAATGAT TTTCAGTTGA GAAAGTTATC CAATATAGAT
GATTTCGTAT CAGTTGATCC AAACTCTAAT TTAAGTTTCT GCGAACGCAA AATAAACTTT
GTAATAATGT CAGATACTTT ACCACAGCTT CATAATAATA TAGATAGGGC TGTTAATTCA
TTGTCTTCAC TTGGTATTAT TTGTGTCAGG TGTGATTTGA GCATGGAAGA TGATTTTTGG
GCACATTTAC CTGGCAATTT TTCTTATATT TTAAACTTTA GGTATACGTT AATAAAATAT
GCTTGTGCAT TTTCGTTGTT GCATTATTTC CCTTCAGGAG CACTTCAAGG AAACAAGTGG
GGACAAGCAA TTACTATGTT TTTTTCAAAT AAGGGTAAAC CTTATTTCTT TAGTTTTCAT
GTGTTTGATA AAGGACACAC TTTAATGGTT GGTAGTCCTC AATCTTCAGT TACTATGTTA
CTGAACTTTT TATTGTCAGA ATCTATGCAG TTGAATGCAC GAATTGTCTT GCTAGATTAT
ACTGGTAAGT CTATTGTTTT TGTTAAGGCT ATGGGTGGTC AGTATTATAG AGCAGACCAT
AGGCGTGATT ATCAGGAAAT GTCGTTTAAT TTCTTTCAAG TTGAAGATAC TGCACTTAAT
CGTAGAATCG TTACTGGTGT TTTGCAAAGA ATGTTGAATG TTAAAAACAT AACTGAGGAA
GTTAATAGTG CAATAGATAG AATAGTTAAT GATCTTTTTA CGTTGCCTCT TGAGTCTAGA
ACTATAAATA GTATTGCTGA CCATGTCAGT ACACTGGGTA CCAATGCTAG TCAATGGTTA
AATAATGGGG AGTTTGCGCA TTTACTAAAG GAAGATGCTA ATATTGATTG GGCAGCAAAA
GTTTTAGGGT TGAATATTGG TATTTTGTTC TCTAAACCTC AATGTGCTTC TGTTATTGTT
TATTACTTTT TGCATGCTTT AATTAATTAT CTTGATGGGT CTCCTACGGT TTTAGTAATA
GATGAAGCAT GGATTTTGGA TTATGTTTTT ACTAGTGATC AGGAATTTGA TGAGTGGATT
GAAATGATGA ACAAATTAAA TGTTGTTGTT GTATTTGCTG GTGAAAACAT TCCAGCTATT
ATTTCCAGTA ATATCATTTG TAGGTTTAAT CAGCATGTTG AAACACAAGT TTTCATGCCA
AATTCAGTAT CAACTAATAA AATGTATATG AGGGCATTTA ATCTATCAAA GTCAGAATGT
AATACTATGT TTCAAATGCC ATCTCAGGAA GGATATTTTT TCGTAAAGCA GGATAATGAT
TCAGTAGTAT TGTCTTTCAA TTTGCCAAAT ATACCAGAAA CTAATGTTCT TTCTGCTAAT
AAGAATACAA TTCGGTATAT GTATGAATCT ATTAGTAGTC ATGGGGATAA TGTAAGAGAA
TGGCTGCCTG CATTTTATAA GAAATGTGGA GCTTAA
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| Protein sequence | MSFVKEMIGH SSDMNNFSRK RRDNTSSKGD FIPAACHYDE NTILNKDGEL VQIIKIEDYV
LTHYVNDKDL RTVVRNSIVN SVEVPEVSFW IYTVRKPHKF DFARKSINDV SDALGSAHLN
NIGQRVTYIN ELYIAVVTNH LPESMKGVLG ALSFSYVKNK HKDFLKNKID RLNKVTASIL
ENLKKFEVRK LGLIVIDKEK VRSELIEFLY YLTMMHHKEC FLDMVDISGI CSHCSISMGF
NTFKISCDNN QRFGAILAIK DYQDSPLDAV DECLQQDYGF IVVEIIKFAK SKNALKLFQK
QATFLECSND FQLRKLSNID DFVSVDPNSN LSFCERKINF VIMSDTLPQL HNNIDRAVNS
LSSLGIICVR CDLSMEDDFW AHLPGNFSYI LNFRYTLIKY ACAFSLLHYF PSGALQGNKW
GQAITMFFSN KGKPYFFSFH VFDKGHTLMV GSPQSSVTML LNFLLSESMQ LNARIVLLDY
TGKSIVFVKA MGGQYYRADH RRDYQEMSFN FFQVEDTALN RRIVTGVLQR MLNVKNITEE
VNSAIDRIVN DLFTLPLESR TINSIADHVS TLGTNASQWL NNGEFAHLLK EDANIDWAAK
VLGLNIGILF SKPQCASVIV YYFLHALINY LDGSPTVLVI DEAWILDYVF TSDQEFDEWI
EMMNKLNVVV VFAGENIPAI ISSNIICRFN QHVETQVFMP NSVSTNKMYM RAFNLSKSEC
NTMFQMPSQE GYFFVKQDND SVVLSFNLPN IPETNVLSAN KNTIRYMYES ISSHGDNVRE
WLPAFYKKCG A
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