Gene ECH_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0480 
SymbolhemD 
ID3927275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand- 
Start bp460239 
End bp460928 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content28% 
IMG OID637901603 
Producturoporphyrinogen-III synthase 
Protein accessionYP_507296 
Protein GI88658300 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTT TATTAGTGAC TCGACCAAAA AAAGATTCTA TCAAAATTAA GGAATATCTT 
AATAAGCAAG GTTTTAATGT CTACATAGAA CCACTGTTTT CAATAAAATA CCTGATAACT 
AAAATCAATA TAAACGATTT CGATTTAATC ATATCTACAA GCCAGCATAG CATAATCGCT 
TTGAGCAAGA TCACTAAAAA TTGGAATATA CCCATTGTTA CTGTCGGTAA TAATACCATG 
AATACTGCAC AAGAATTAGG ATTTACATCT GTAAAATCAC TCAATGGAAA TATTGATAAC 
GTTATATCTT ATATAAAAAA CCACAACAGA GCTAATATAT TATACATAAG AGGCAAAGAA 
GTTACATATA ACTTAAAAAA AAGTTTTAAC CATTACCATA ACTTTCAAGA GATTATACTA 
TATAATACAA TAGACAGAAA ATACTTGAGT AAATGTTGTT ATAATGCCTT ATTACAAAAC 
AAAATATCAG GTATACTACT TTATTCATCA AGAACTGCTA AAATACTTAT AGAATTAATA 
GCAAAACACA ATATTCAAGA CAAAACAAGA GACATTACAA TATACGCTAT GAGTGATAAA 
ATCGCAAGTA CTGCAAAACA AGCTTGTTGG AAAGCCATAA AAACATCTGA CCAACCTACT 
AACAAATCAT TGCTTTCATT AATACCATAG
 
Protein sequence
MKSLLVTRPK KDSIKIKEYL NKQGFNVYIE PLFSIKYLIT KININDFDLI ISTSQHSIIA 
LSKITKNWNI PIVTVGNNTM NTAQELGFTS VKSLNGNIDN VISYIKNHNR ANILYIRGKE 
VTYNLKKSFN HYHNFQEIIL YNTIDRKYLS KCCYNALLQN KISGILLYSS RTAKILIELI 
AKHNIQDKTR DITIYAMSDK IASTAKQACW KAIKTSDQPT NKSLLSLIP