Gene ECH_0426 details

Gene Information

• Locus tag: ECH_0426
• Symbol: rpsE
• ID: 3927382
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ehrlichia chaffeensis str. Arkansas
• Kingdom: Bacteria
• Replicon accession: NC_007799
• Strand: +
• Start bp: 405793
• End bp: 406317
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637901550
• Product: 30S ribosomal protein S5
• Protein accession: YP_507244
• Protein GI: 88658388
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.712709
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGTTG TAAAGAAATC ACGAAATGTT CATGGTTCTA ATGATTTTTC TGAGTTGATA 
GTTTCTGTTA GGAGAGTTGC GAAAGTTGTA AAAGGTGGCC GTAGGTTTTC TTTCTCAGTT 
CTAGTAGTGA TAGGTGATGA AAAAGGTAAA GTTGGTTGTG GAATAGGAAA GCATCTTGAA 
GTATCTGAAG CTAAAATTAA AGCTGTTAAT GCTGCTAGAA AAAATATGAT CAGGGTACAT 
TTACGTGAAT CTAGAACTTT ACATCATGAT GTAAAAGCTA AGTTTTGTTC AAGTAAAGTT 
ATGTTAAGAT CAGCTAAGGT AGGTACAGGT ATTATAGCTG GTGGTTCTAT ACGTTTAATT 
TTTGAAGTTT TAGGAGTGCA AGATGTTGTA GCAAAGTCTA TAGGCTCCTC AAATCCGCAT 
AATGTTGTAT ATGCTGTTTT TGCTGCTTTT AGGAAAATGC TATCGCCAAA GCAGGTAGCT 
AATAAAAGGA GTAGAAAGAT AGGTGATATT ATTGAAAATA GGTAA 

 

Protein sequence

MDVVKKSRNV HGSNDFSELI VSVRRVAKVV KGGRRFSFSV LVVIGDEKGK VGCGIGKHLE 
VSEAKIKAVN AARKNMIRVH LRESRTLHHD VKAKFCSSKV MLRSAKVGTG IIAGGSIRLI 
FEVLGVQDVV AKSIGSSNPH NVVYAVFAAF RKMLSPKQVA NKRSRKIGDI IENR