| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0402 |
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| Symbol | rpsA |
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| ID | 3927480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | - |
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| Start bp | 393235 |
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| End bp | 394938 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637901526 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_507222 |
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| Protein GI | 88657606 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGACC TTCAAACAAA AACAAATTTA GGATCAGAAA ATTATTTACA TAATATAAAG
AAAATAAAAT CCAACAAGTT TATTAGCCAT AATCTTGAAG TAGAAGATTC CGATAATGAT
AGTAGCTCAG AGTTTCAGCA TGCGTTAAAA GAATTTATTG ATGACAGTGT CAAAGAAGGA
CAAATAATAG AGGGCACTAT TATATGCATA GATAAGGGGT ATGTAACAAT AGACTCAGGA
TTAAAATCCG AAAGTATTGT TTCACTTAAA GAATTTGAGC TTGGTGATGA TTATCAGAAT
ATTAGTATAG GATCAAAAGT AAAGCTATAC TTAGAGAAAA TCGAAGGTCG TAATGGTAGT
GTAGTATTAA GTAGAGAAAA AGCTATCAGA GATGAACTAT GGCAGAAACT TGAAGAAGCT
GCAGAAAAAA AAGAAGATGT TGAAGGAGTA ATATTTAGCT CAATTAAATG TGGGTACACT
GTAGACATAA AAGGTGTTGT GGCATTTTTA CCAGCAAGCC ATGTAGCTCT AAGACAAGTT
AAAGACATCA CTCCCCTATT AGGTAAAAAG CAAAAGTTCC GTATATTAAA GATGGATAAA
AAGCAAGGTA ATATTGTAGT CTCAAGAAAA GCTATATTAG AAGAATCACT TGCAGATGCT
AAAAGTTTAT ATCTCAGCCA ATTAAATGAA GGAGATATTA TTGAAGGTAA AGTTAAAAGC
ATAACTAAAT ATGGTGTATT CATAGAAATA CATGAATCTC CTTCAGTAGG TGTAGTTGAC
GGGCTATTGC ATATAACTGA TATATCATGG AGCCGTGTAA GTCATCCTTC AGCTGTTTTC
TCATGTGGCC AAACTGTCAA AACAAAAATT ATAAAAATTG ACCGTGAAAA TAAGAAAATT
TCTCTTGGTG TAAAGCAATT AGAGGAAAGT CCATGGTCAA ATATTGAGAA AAAATATCCT
GTTGATAGTA TCCATAAAGG TATTGTCACA AGCATTGAGG AATATGGGGT CTTTGTTGAA
TTAGAAACAG GGATAGAGGG GTTAGTACAC GTATCCGAAG TAAGCTGGAC AAAAAATTCT
CTTCCTATAA ACCAGTTATT TATGAGAGGT GAAGAAATTC AAGTTAAGGT ATTAAGCATA
GACACAGCTA AAAGTCGCAT GAGTCTTAGT ATGAAAAGGT GTCAAGATAA CCCATGGCAG
GCGTTTACAC TAAAGTATCC TTTAGGTTCT ATTGTATCAA CAAAGATAAA AAATATTACA
AATCTTGGTA TATTTGTTTC ATTTCAGGAT AACACACTCA ATGATGGCAT TGAAGGGTTA
ATTCGTACTA CAGAGTTAAG TTGGTCCTTA TCACCAGAAG CAGCAATAAA AAAATATAAC
GTTGGAGATT CTGTAGAAGC AAAAATACTC ATGATAAATC CAAATAAAAG CAAGATAGAT
CTTGGAGTAA AACAACTAGA GTATGACCCT TTTCTTGATT TATTAAAGAA AATTAACTTA
GGAGATAAAA TACCAGTTAC AGTTACCAAA GTTGTTGAAG ATACTGGTAT ATTAGTTGAT
GTATTCAATG GATCAAATAG TTTCAACTTA CTAATTGAAC AAGAATACCT ACCTGATAAT
AAAAAATTCT TCCCAGGAGA TAGGTTAGAA GCTGAAGTAT TGCTTATTGA AACTTATAAT
ATGATACTAT CATTAAAGCA CTGA
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| Protein sequence | MEDLQTKTNL GSENYLHNIK KIKSNKFISH NLEVEDSDND SSSEFQHALK EFIDDSVKEG
QIIEGTIICI DKGYVTIDSG LKSESIVSLK EFELGDDYQN ISIGSKVKLY LEKIEGRNGS
VVLSREKAIR DELWQKLEEA AEKKEDVEGV IFSSIKCGYT VDIKGVVAFL PASHVALRQV
KDITPLLGKK QKFRILKMDK KQGNIVVSRK AILEESLADA KSLYLSQLNE GDIIEGKVKS
ITKYGVFIEI HESPSVGVVD GLLHITDISW SRVSHPSAVF SCGQTVKTKI IKIDRENKKI
SLGVKQLEES PWSNIEKKYP VDSIHKGIVT SIEEYGVFVE LETGIEGLVH VSEVSWTKNS
LPINQLFMRG EEIQVKVLSI DTAKSRMSLS MKRCQDNPWQ AFTLKYPLGS IVSTKIKNIT
NLGIFVSFQD NTLNDGIEGL IRTTELSWSL SPEAAIKKYN VGDSVEAKIL MINPNKSKID
LGVKQLEYDP FLDLLKKINL GDKIPVTVTK VVEDTGILVD VFNGSNSFNL LIEQEYLPDN
KKFFPGDRLE AEVLLIETYN MILSLKH
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