Gene ECH_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0195 
Symbol 
ID3927364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp186545 
End bp187240 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content30% 
IMG OID637901319 
Productshort chain dehydrogenase/reductase family oxidoreductase 
Protein accessionYP_507019 
Protein GI88658138 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAA CACATAAAAA AGGAGCATTA ATTACAGGCG GTGCACGTAG GTTAGGCAAA 
GCAATAGCAA TGTTCTTAGC TAACAATGGA TATGATATAG CCATTCATTA TAACATTTCT
GAAGCACATG CGTTACAAAC AAAAAATACT ATTGAAGAAT TATACCACCA AAAGTGCATT
CTCATACAAG CTGATTTAAT AGAATTTGAT TCACTAAGTC CTATAATAGA TAAGACTTTT
GAATTCATGC CCTATTGTAA TTGCATTATT AACAGTGCTT CAGTGTTCTA CAAAAACACA
CTGATGAATA CCTCTATTAA AGATTTTACT GATCACTATA ATTTGCACAT ACGTGCTCCT
CTATTTTTAA CGCAATATTT CGCAAAAAAA TGTACCACTA CAGGAAATGT TATTAATATG
ATTGATGCAA TGATTACGAA AGATAGTACA AAATATTTTA TATACACAAT GTCAAAAAAA
TCACTACTAG ATTTAACAAA ATTTACAGCT GTAGAATTAT CACCAAAAAT AAAAGTCAAT
GCTATTGGCC CCAAAATGAT TCCTCACCAC TTTCTAGATA ACATAAACCA TCATAATATA
ATGGATAACA TAGAAGTTAA GACTATCCTT ACCAGAATAG CAGAACTATT AGATGATAAC
AACAATGAAA CTGGCACTGT AAATTTTATA CAATAA
 
Protein sequence
MLKTHKKGAL ITGGARRLGK AIAMFLANNG YDIAIHYNIS EAHALQTKNT IEELYHQKCI 
LIQADLIEFD SLSPIIDKTF EFMPYCNCII NSASVFYKNT LMNTSIKDFT DHYNLHIRAP
LFLTQYFAKK CTTTGNVINM IDAMITKDST KYFIYTMSKK SLLDLTKFTA VELSPKIKVN
AIGPKMIPHH FLDNINHHNI MDNIEVKTIL TRIAELLDDN NNETGTVNFI Q