Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_0095 |
Symbol | secF |
ID | 3927189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | + |
Start bp | 84942 |
End bp | 85823 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637901219 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_506924 |
Protein GI | 88658165 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTTTTTC TTAGTGATAT AAATATAGAC TTTTCTAAAT ATAGGATATG TGCTCTATCT TGTAGTGGCG TCCTCATGCT TATTTCAATA TTACTTGTTT TATTAAAAGG CATATGCTTT GGTACAGATT TTGCAGGTGG TATAATAATT GAACTTCGTG CAGATCAAGT AGATGTTAAG AGTGTTAATT TAAAACTGCA GGAAAATGGT TTTGTAGGTT TTTCTGTTCA AGGTTTTAAA AATAATGATA GAGAACTGAT GGTTCGTTTT AAAAATGAAA AAGATTCAGA TCAATCGGAT ACTGTTGAGA AAATAAAAGG AGTGTTAAAT AAAATATTGG GTGAAGTAAC TTATTTAAAA ATAGATTATG TTGGACCACA AGTAGGGTAT AAACAGATTT TTGAAGGATT GTGTGCAATA ATATTTTCAT TATTAGGAAT GTTTTTGTAT TTGTGGGTAA GATTTCAGTG GAGATTTGCA TTAGGTGGTG TTTTGGCTCT GATACATGAT GTTGTATTAA CATTGGGGTT GGTTAGTTTA TGTAATATTG AATTTAATCT TTCTTCAACT GCAGCAATCT TAACAGTTAT CGGTTATTCA GTAAATGATT CTGTGGTAAT ATATGACAGG ATTAGGGAAT TGCTTAAAAA GAAACTGCAA AAAAAACTGT CTGATGTCAT TAATATCAGT ATTAACGCTA CTTTATCAAG GACAATATTG ACATCTGGTA CCACTATGCT AGCGTCTGTC CCTTTAATGT TGTTATGTCA GGGTACAGTT AGAGAATTAA GCATAATTGT ATTCTTTGGT ATAGCTGTTG GGACATATTC TTCAATATTT ATAGCAACAA CTTCTTTATC TAATGATATT AACAAAACCT AG
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Protein sequence | MVFLSDINID FSKYRICALS CSGVLMLISI LLVLLKGICF GTDFAGGIII ELRADQVDVK SVNLKLQENG FVGFSVQGFK NNDRELMVRF KNEKDSDQSD TVEKIKGVLN KILGEVTYLK IDYVGPQVGY KQIFEGLCAI IFSLLGMFLY LWVRFQWRFA LGGVLALIHD VVLTLGLVSL CNIEFNLSST AAILTVIGYS VNDSVVIYDR IRELLKKKLQ KKLSDVINIS INATLSRTIL TSGTTMLASV PLMLLCQGTV RELSIIVFFG IAVGTYSSIF IATTSLSNDI NKT
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