Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0961 |
Symbol | dnaG |
ID | 3931738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | - |
Start bp | 847304 |
End bp | 849043 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637901115 |
Product | DNA primase |
Protein accession | YP_506825 |
Protein GI | 88608559 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTAAAAA AATACATAGA ACTAATTAAA GAAAGGATTC CTGTTTCCGA GGTTGTAAGT AGGACGGTTA AACTCAAAAG AGTTGGATCT AGACTTATTG GAAGATGTCC ATTCCATCAA GAAAAGACGC CTTCGTTCTC GGTGAATGAT AAAGGTAAAT TCTTTTATTG TTTTGGTTGT GGTAAAAGTG GCGACGTTAT AGATTTTGTT TCCCTAACAA AACGATTAGA TCTGAGCGAA GCTGTTGAAG AGTTAGCTTC CAGCATAGGC ATAAAAATAG ACAAGAAAAA TTCTGGGACA GAAAGTTTTA TCCAAGTATT CCAATTTTTA GAAGAGTTAA GAGATTGGTT TTGTAGTAAT TTGAACTCTA GAGTCGGTCA AGAAGCAAGT TACTACATAA GAAACCGTCT AGATGATGAT GTGATTTCTG AATTTAAGTT GGGTTATTGT CCTTCTAATT TGACCTCCTT CATCAACAAA ACTAAGAATT TTCCTAGCAC TGTGATTAAA AATTCTGGAG TCCTTGATAA ACTGGGTAGA TGTTACTTCA GAGATAGACT GGTTTTTCCA ATACACAATA TACAGGGAAA AGTAATTGGA TTTGGAAGTA GGGTTGTAAA GGAGGGTATT TTCCCAAAGT ACATAAACTC TTGTGAAACG GAATTTTTCA AAAAGAGTGA ACTGCTTTAT AACATTGATA AGATTCCGAA GAATTCTGAA GAACCCATTA TATTAGTAGA GGGATATATG GATGTTATAT CTCTCTGCCA ATTTGGGTAT AAAAGTGTTT TGGGTATCTT AGGAACGTCT ATAACGTCAC ATCATCTTAA ACTACTCAAC CGATTAAGGA GAAACCTAAT ATTTTGTTTT GATGGTGACA ATGCTGGAAT AAAAGCTGCT GGTAGAGTAG TGGAGCTCAT CATGGATGAG TTCATAAATT CTCTAGAGAT AAAAACTACT TTCTCTTTCT TACCCATAGG TAAAGATCCC GATGATCTTG TGAGAAGTGA TAGAGCTGCG TTTCAGCGTG TTTTAGATGG TGCCAGAAGT TTATCTGATA CAATATTCTT TTTAGCTAAA TACGGGAGGC AATGCAGTTC GCCAGAGGAC TTTATAGAGT TGGAAAAGAT CTTAGAAAAA TATCTGATAA ACGTGAAGGA CTATAAAATT AGAAAACATT TCCAAGATTT TTTTCAGCAG CAAATCTTTT TACTTAAAAG GAGTCTTCGT CAGCGTAATT TTATTCCTGC GTATAGGGGT GGCGAAGACG CCACGCATTT TGTAGATGTT AAAAAACTTT CTTCCTCCGC CAGTATACAC GTAGATAAGA AAGTCTTATT GCTGAAGATA GTTATAAAAT TTCCAGAAAT TCTGCGGAAT GGTGATCGTG AAGAATACTT TTCTTTGTTA AAATTGAGCG ATCCACGACA TGTAAAACTC CAATCCTCCA TAGTGCAATT GCTCAACACC TCAATCGATA TTAGTGGTGC ATCTCTTGAA AGGGCATTGC TTGCAGACAG CGAGACAGAA GCGTCTTATA AGCTTCTGAG TGATTTAGCT TCGCTTCCGG ATGATATAGA AAAAGCAACC TTTTTATGGG ATAGACTGCA GAAACAATTA TGGCGCGACG AACTCCGAGA AGAGTATCGA CGAATGATTC ATTCATCTGA TCTAGATGAG AACAAAATGG AAGAAGCTCA AAGAATCTTG GTAAAGATTC GGGAGGCAGA AAAAGAATGA
|
Protein sequence | MLKKYIELIK ERIPVSEVVS RTVKLKRVGS RLIGRCPFHQ EKTPSFSVND KGKFFYCFGC GKSGDVIDFV SLTKRLDLSE AVEELASSIG IKIDKKNSGT ESFIQVFQFL EELRDWFCSN LNSRVGQEAS YYIRNRLDDD VISEFKLGYC PSNLTSFINK TKNFPSTVIK NSGVLDKLGR CYFRDRLVFP IHNIQGKVIG FGSRVVKEGI FPKYINSCET EFFKKSELLY NIDKIPKNSE EPIILVEGYM DVISLCQFGY KSVLGILGTS ITSHHLKLLN RLRRNLIFCF DGDNAGIKAA GRVVELIMDE FINSLEIKTT FSFLPIGKDP DDLVRSDRAA FQRVLDGARS LSDTIFFLAK YGRQCSSPED FIELEKILEK YLINVKDYKI RKHFQDFFQQ QIFLLKRSLR QRNFIPAYRG GEDATHFVDV KKLSSSASIH VDKKVLLLKI VIKFPEILRN GDREEYFSLL KLSDPRHVKL QSSIVQLLNT SIDISGASLE RALLADSETE ASYKLLSDLA SLPDDIEKAT FLWDRLQKQL WRDELREEYR RMIHSSDLDE NKMEEAQRIL VKIREAEKE
|
| |