Gene NSE_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0961 
SymboldnaG 
ID3931738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp847304 
End bp849043 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content36% 
IMG OID637901115 
ProductDNA primase 
Protein accessionYP_506825 
Protein GI88608559 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAAAAA AATACATAGA ACTAATTAAA GAAAGGATTC CTGTTTCCGA GGTTGTAAGT 
AGGACGGTTA AACTCAAAAG AGTTGGATCT AGACTTATTG GAAGATGTCC ATTCCATCAA
GAAAAGACGC CTTCGTTCTC GGTGAATGAT AAAGGTAAAT TCTTTTATTG TTTTGGTTGT
GGTAAAAGTG GCGACGTTAT AGATTTTGTT TCCCTAACAA AACGATTAGA TCTGAGCGAA
GCTGTTGAAG AGTTAGCTTC CAGCATAGGC ATAAAAATAG ACAAGAAAAA TTCTGGGACA
GAAAGTTTTA TCCAAGTATT CCAATTTTTA GAAGAGTTAA GAGATTGGTT TTGTAGTAAT
TTGAACTCTA GAGTCGGTCA AGAAGCAAGT TACTACATAA GAAACCGTCT AGATGATGAT
GTGATTTCTG AATTTAAGTT GGGTTATTGT CCTTCTAATT TGACCTCCTT CATCAACAAA
ACTAAGAATT TTCCTAGCAC TGTGATTAAA AATTCTGGAG TCCTTGATAA ACTGGGTAGA
TGTTACTTCA GAGATAGACT GGTTTTTCCA ATACACAATA TACAGGGAAA AGTAATTGGA
TTTGGAAGTA GGGTTGTAAA GGAGGGTATT TTCCCAAAGT ACATAAACTC TTGTGAAACG
GAATTTTTCA AAAAGAGTGA ACTGCTTTAT AACATTGATA AGATTCCGAA GAATTCTGAA
GAACCCATTA TATTAGTAGA GGGATATATG GATGTTATAT CTCTCTGCCA ATTTGGGTAT
AAAAGTGTTT TGGGTATCTT AGGAACGTCT ATAACGTCAC ATCATCTTAA ACTACTCAAC
CGATTAAGGA GAAACCTAAT ATTTTGTTTT GATGGTGACA ATGCTGGAAT AAAAGCTGCT
GGTAGAGTAG TGGAGCTCAT CATGGATGAG TTCATAAATT CTCTAGAGAT AAAAACTACT
TTCTCTTTCT TACCCATAGG TAAAGATCCC GATGATCTTG TGAGAAGTGA TAGAGCTGCG
TTTCAGCGTG TTTTAGATGG TGCCAGAAGT TTATCTGATA CAATATTCTT TTTAGCTAAA
TACGGGAGGC AATGCAGTTC GCCAGAGGAC TTTATAGAGT TGGAAAAGAT CTTAGAAAAA
TATCTGATAA ACGTGAAGGA CTATAAAATT AGAAAACATT TCCAAGATTT TTTTCAGCAG
CAAATCTTTT TACTTAAAAG GAGTCTTCGT CAGCGTAATT TTATTCCTGC GTATAGGGGT
GGCGAAGACG CCACGCATTT TGTAGATGTT AAAAAACTTT CTTCCTCCGC CAGTATACAC
GTAGATAAGA AAGTCTTATT GCTGAAGATA GTTATAAAAT TTCCAGAAAT TCTGCGGAAT
GGTGATCGTG AAGAATACTT TTCTTTGTTA AAATTGAGCG ATCCACGACA TGTAAAACTC
CAATCCTCCA TAGTGCAATT GCTCAACACC TCAATCGATA TTAGTGGTGC ATCTCTTGAA
AGGGCATTGC TTGCAGACAG CGAGACAGAA GCGTCTTATA AGCTTCTGAG TGATTTAGCT
TCGCTTCCGG ATGATATAGA AAAAGCAACC TTTTTATGGG ATAGACTGCA GAAACAATTA
TGGCGCGACG AACTCCGAGA AGAGTATCGA CGAATGATTC ATTCATCTGA TCTAGATGAG
AACAAAATGG AAGAAGCTCA AAGAATCTTG GTAAAGATTC GGGAGGCAGA AAAAGAATGA
 
Protein sequence
MLKKYIELIK ERIPVSEVVS RTVKLKRVGS RLIGRCPFHQ EKTPSFSVND KGKFFYCFGC 
GKSGDVIDFV SLTKRLDLSE AVEELASSIG IKIDKKNSGT ESFIQVFQFL EELRDWFCSN
LNSRVGQEAS YYIRNRLDDD VISEFKLGYC PSNLTSFINK TKNFPSTVIK NSGVLDKLGR
CYFRDRLVFP IHNIQGKVIG FGSRVVKEGI FPKYINSCET EFFKKSELLY NIDKIPKNSE
EPIILVEGYM DVISLCQFGY KSVLGILGTS ITSHHLKLLN RLRRNLIFCF DGDNAGIKAA
GRVVELIMDE FINSLEIKTT FSFLPIGKDP DDLVRSDRAA FQRVLDGARS LSDTIFFLAK
YGRQCSSPED FIELEKILEK YLINVKDYKI RKHFQDFFQQ QIFLLKRSLR QRNFIPAYRG
GEDATHFVDV KKLSSSASIH VDKKVLLLKI VIKFPEILRN GDREEYFSLL KLSDPRHVKL
QSSIVQLLNT SIDISGASLE RALLADSETE ASYKLLSDLA SLPDDIEKAT FLWDRLQKQL
WRDELREEYR RMIHSSDLDE NKMEEAQRIL VKIREAEKE