| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0956 |
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| Symbol | mdh |
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| ID | 3931592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 840464 |
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| End bp | 841411 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637901110 |
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| Product | malate dehydrogenase, NAD-dependent |
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| Protein accession | YP_506820 |
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| Protein GI | 88608796 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTAA GTTTAATTGG TGCTGGCAAT ATTGGTGGGA CCTTGGCGTA TTTAATAGCC
TCGAAGAAGT TGGCTTCAGA GGTCGAATTA ATTGACGTTA ACGGAGATCT TGCAAGAGGC
AAAGCATTAG ATGTTTCACA AACTCTTCCA CTCATTGGTT ATACAATGAA GATCAATGGT
AGCGCCAATA TGGAGAGAAT CAAAGGCTCT TCGGTAATTA TCATAACTGC CGGTATTCCA
CGAAAGCCTG GCATGACACG TGAGGAACTC ATTGATGTGA ATGCTGTTGT TATGAAAGAA
GTAGGGGAAA AAATAAAAAA GTTTGCCCCG AAAGCGTTTG TGATAGTTGT GACTAACCCG
CTAGATGTAA TGGTTTGGGT CCTTTACAAG GCAGCCGAAA TCAGCCCTGA CAAGATTGTT
GGTATGGCAG GTGTACTCGA TGCAAGCAGA ATGAATCTTT TTCTTGCACA AGAGCTAGGT
GTTTCAGTAG CGGATGTTAA ATCGCTGGTA TTGGGTAGTC ACGGTGACTC TATGGTTCCC
TTGTTTAGGC ACTCTACGGT TTCTGGTATG AGCCTACCTG AGTTGGTTAG TGTGGGTTTA
ATAACGAAGG ATAAGGTGGA CTCAATTATT GAACGTACTC GTAGTGGTGG TGCCGAGATA
GTTGCCCTCT TGAAAACTGG TTCAGCCTAC TACACTCCTG CTGCGTCTGT GCTGGAAATG
GCTGAGGCAT ATCTGTTGGA TCAGAAAAAA ACGCTCGTGT GCTCCGTGAT GATGAGGGGT
CGGTATGGAG TGGAGGATGA TATCTTTTCT GGTATACCAG TTATCATGGG ATCAGGTGGT
GTGGAGCGTG TAATTGAACT TGATCTGACT CCTGATGAGA GGAGGATGTT TGAAAATTCT
GTTGCTGCAA CGAGAAAATT AGTGCTGGAA GCGCGAAAAT ACTTTTAG
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| Protein sequence | MKVSLIGAGN IGGTLAYLIA SKKLASEVEL IDVNGDLARG KALDVSQTLP LIGYTMKING
SANMERIKGS SVIIITAGIP RKPGMTREEL IDVNAVVMKE VGEKIKKFAP KAFVIVVTNP
LDVMVWVLYK AAEISPDKIV GMAGVLDASR MNLFLAQELG VSVADVKSLV LGSHGDSMVP
LFRHSTVSGM SLPELVSVGL ITKDKVDSII ERTRSGGAEI VALLKTGSAY YTPAASVLEM
AEAYLLDQKK TLVCSVMMRG RYGVEDDIFS GIPVIMGSGG VERVIELDLT PDERRMFENS
VAATRKLVLE ARKYF
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