Gene NSE_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0918 
Symbolrnc 
ID3931585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand- 
Start bp815133 
End bp815801 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content42% 
IMG OID637901072 
Productribonuclease III 
Protein accessionYP_506782 
Protein GI88608789 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.300487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTAG AAGAACTACA ATCCTTACTT GGAGTGTATT TTAAAAACAA AGACTTACTT 
GTCGAAGCTT TAACGCATCC AAGTGTTGAA AAGTGTCCAT CTTACGAGAG ATTAGAATTT 
CTTGGGGATG CAGTGTTAAA TCTGGTTATT GCTTCGATGC TTTACGATCT TTTTCCGGGT 
GATCCTGAAG GTAGACTTTC TCATAGGCAA AGTGCACTTA TTTGCAAGAA CACTCTCGCT 
ATGCTTGCTC GTCAGATGAA TTTAGGTGAT TATATTCGCC TTTCAAGTTC GGAGGAAGCG 
GGCGGTGGAC GGGACAAAAC AAGTAATCTA GAGAATGTTT TAGAAGCCCT CGTAGGAGCT 
ATTTTCCTGG ATGCAGGTCT TGAAACAGTT ACCTGCTTCA TTAAGAAACG TTGGTATGGG 
TTGGCTGTTC AATCAGATTC TATTGAGCCA AATCCAAAAA GCACACTTCA AGAGCTGCTT 
CAAGCAAAAG GAATGAAGCC ACCGATATAT AACGTCATAA ATAGATCAGG GCCAGCACAC 
CTACCCATTT TTGAAATAGA AATCCGCGTA GATGGGAAAA AAAGGCGAGC TACTGGCAAA 
AGCAAAAAGC TAGGTGAGGA AAATGCAGCA AGGATGATGC TTGAAGAATT GAAAGCGGAA 
ACCCGGTAG
 
Protein sequence
MELEELQSLL GVYFKNKDLL VEALTHPSVE KCPSYERLEF LGDAVLNLVI ASMLYDLFPG 
DPEGRLSHRQ SALICKNTLA MLARQMNLGD YIRLSSSEEA GGGRDKTSNL ENVLEALVGA 
IFLDAGLETV TCFIKKRWYG LAVQSDSIEP NPKSTLQELL QAKGMKPPIY NVINRSGPAH 
LPIFEIEIRV DGKKRRATGK SKKLGEENAA RMMLEELKAE TR