Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0899 |
Symbol | recR |
ID | 3931543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | - |
Start bp | 801342 |
End bp | 801932 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637901054 |
Product | recombination protein RecR |
Protein accession | YP_506765 |
Protein GI | 88608709 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00615] recombination protein RecR |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000213296 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAGA AGATAAAAGC TCTAATAAAA CTCGCTGAAA ATTTACCAGG ATTGGGACCC AAGTCAGCTA GGAGAATAGT CTTGCATTTA TTGAAATCGA GGGAGACAAC TTTAATTCGG TTTATCGATA CGATGCAGCT TCTTTATGAG ACTATCAAGC ACTGTGAGCT GTGCGGAAAT CTTGAAAGTG AATCACCGTG TTCAATTTGT AGAAGCACTA AAAGAAGCTC AGATATTGTA TGCGTAGTCG AAGAGATTAC TGATCTCTGG GCAATAGAAA AGGCCGGGGT ACATAATGGA AGATATCATG TGCTAAATGG TGCATTATCC ATTGTGGATG GTATTACTCC AGAAACGTTA CAGATAGAAA AGTTAAAACG GAGAGTTTCT TCCGGAGCTG TAAAAGAGCT GATCATTGCT ACCAACGCGA CTGTAGAGGG TCAGACGACA GCACAATACA TAGTCGAGGT TTTAAAAGGT ACACAGGTAA AATTGTCGTT TTTAGCGCAT GGCATACCTG TGGGCAGTGA GATGGATTAT CTAGATGAGG GAACGCTAGG AATAGCATTC GCGAATCGGA GAGCTGTATA A
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Protein sequence | MDKKIKALIK LAENLPGLGP KSARRIVLHL LKSRETTLIR FIDTMQLLYE TIKHCELCGN LESESPCSIC RSTKRSSDIV CVVEEITDLW AIEKAGVHNG RYHVLNGALS IVDGITPETL QIEKLKRRVS SGAVKELIIA TNATVEGQTT AQYIVEVLKG TQVKLSFLAH GIPVGSEMDY LDEGTLGIAF ANRRAV
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