| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0783 |
|---|
| Symbol | |
|---|
| ID | 3931643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | - |
|---|
| Start bp | 694897 |
|---|
| End bp | 696144 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637900939 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_506658 |
|---|
| Protein GI | 88608756 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGAGA AGTCTGGGTT CATTAAACAA ATTATTGTAA CCCTTCTATG TAACAGCCTC
GTGTGGTACG ACTATGCACT TTATGGTCAC CTTATAGGTA TCATTAATAT CTTATTCTTC
CCTGAAATTA ACCCGGTAAC ACAACTCCTC TCATCTTTTG GAACATTTGC TGTTGGTTTC
TTGATGAGGC CAATAGGGGC GGTTTTTTTT GGGCACATAG GAGACAAATA CGGTAGAAAA
ATTGGGGTTC TGCTATCCCT GATGATGATG TTCTTGCCTG TGGGGATGAT AGCGGTTTTA
CCGACATATC ACAGTATTGG TACGTCGGCG ATTGTCCTGC TTATTTTGAT TAGATTAATT
CAAGGATTTG CTCTTGGTGG GGAAGTTGGA AATGTACTCT TCTTGATAGA ATGCAGTCCT
CAGAAGTATA GGGGATTCTT TGGCAGTTTT GAGGTGCTCA GTGCAGTGAT AGGTGCTGCA
ATGAGCAGTG TCGTGGTTCT GATATGTAGA AACATAATTC CTGAGGAAGC GTTTTTGAGT
TGGGGTTGGA GAGTACCTTT TGTTATAGGA ACATGTGTCG GTGTCTTGGG TGCAGTTCTT
AGAAATACAC TTGGCGAAAC GCCAGTCTTC GAGAGTGTCA AGAGGTCTGA CATCCTACCT
GTAACGAAAC TCTTTGGTGA ATATAAGAAG GCATTTTTTG TTTCAATTGG AATAGACAGT
TTGGAAGAAA CAAGTCTGTA TCTTTTTCTT GTTTTCTTGG ATGTTTATTT TGCAAATAAA
ATGGGGTTTT CTGGTGCAAC CGTTGGATTA GTACATCTAA TGTTCTTGCT TTTGCTTGCT
GTGTTGACCT TGTTTTCGGC GCTACTATCT GATTTCTTCG GTAGGAGACT AATACTCTCA
TTAGCTGCAA TACTCGCGAT TGTGTCTGCG TATCCGATCT TTTTTCTCAT AGAAAGCGGG
GGGTTGGGGA ATATTATTAT TGCAAAAATC TTGTTTGTGG TGATAGTGGG GTTCTCATTG
GGGCCCGTGA GCACCGCCGT GTATGAAATA TTTCCTGCTG AGATTTCTTA TACAGGACTG
GCAATCTCCC GAAATATCTC AAGTGCGCTG TTTGGAGGTA TGGCACCAGC TTTTACAATG
TTTCTTATTG CAGTGACAGG TAATAATCTT TCAGCTGCGA TTCCTTTGAT TCTTGTTGGG
GTTTTGACTT TAGGTTCTCT ATATTTTTAT TCAAAAGTAT TACACTAG
|
|---|
| Protein sequence | MSEKSGFIKQ IIVTLLCNSL VWYDYALYGH LIGIINILFF PEINPVTQLL SSFGTFAVGF
LMRPIGAVFF GHIGDKYGRK IGVLLSLMMM FLPVGMIAVL PTYHSIGTSA IVLLILIRLI
QGFALGGEVG NVLFLIECSP QKYRGFFGSF EVLSAVIGAA MSSVVVLICR NIIPEEAFLS
WGWRVPFVIG TCVGVLGAVL RNTLGETPVF ESVKRSDILP VTKLFGEYKK AFFVSIGIDS
LEETSLYLFL VFLDVYFANK MGFSGATVGL VHLMFLLLLA VLTLFSALLS DFFGRRLILS
LAAILAIVSA YPIFFLIESG GLGNIIIAKI LFVVIVGFSL GPVSTAVYEI FPAEISYTGL
AISRNISSAL FGGMAPAFTM FLIAVTGNNL SAAIPLILVG VLTLGSLYFY SKVLH
|
|---|
| |