| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0742 |
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| Symbol | virB9-2 |
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| ID | 3932281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 662908 |
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| End bp | 663630 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637900898 |
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| Product | type IV secretion system protein VirB9 |
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| Protein accession | YP_506618 |
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| Protein GI | 88608571 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.11776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCATTC GTGAGTTGTT TTTTGTTGTG TTTTTCGCAC TTTTCTGCAT ACGAGCATAT
GCCCTCGAGC ATGATCCGCG TGTGCGAACT CTCGTCTATT CGGAGAGCAC AATCTTCCAG
GTGGATACGA GTTATGGATA TCAGTCTTTC ATCAAGTTTT CTGATAAGGA GAGAATCAAA
ACAATAGCTC TTGGCAACAG TATTGGTTGG AGTGTAAATC CTGTGGGTGA AAAAATATTC
CTGAGACCTC TTGAAAAGGG ACTTTCAACA AACATGGTTG TAGTTACTGA TAAGCGCACT
TACGTGTTTG ATTTGCTTAG TGCCTCCGAA GAGGACGAGA AGAAAAGAAA AGTGAATGAG
ACTAGCTACA TGGTACGGTT TCAGTATCCT GATGAGGTCT CCTCGGATGC CTCAAGTACG
GGTGAACTTT CTGTGGGGGG TAAATTATAC GAATTACATT ATGGCTCTCT TCGTCGAAAT
TACTCCTTTA GTGGGAAGGC AGATTTTGAG CTCAAAGATG TGATGAATAA TCTTGGGCTC
ACTTTTTTCA AATTTGAAGG AGACAATATC CCTAGAATTT TCATTGTGAA TTCAGATCGG
AGTGAGACTC GAGCTAGGAT GTGGCGGTTT AGGGATTATA TGGTGATAGA AGGTGTGCAT
AAGAAATTGC ATCTACGTTA CAAGGATTCC GTGTTAGAAG TGGTGAATAA TGATTTGGGG
TAG
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| Protein sequence | MIIRELFFVV FFALFCIRAY ALEHDPRVRT LVYSESTIFQ VDTSYGYQSF IKFSDKERIK
TIALGNSIGW SVNPVGEKIF LRPLEKGLST NMVVVTDKRT YVFDLLSASE EDEKKRKVNE
TSYMVRFQYP DEVSSDASST GELSVGGKLY ELHYGSLRRN YSFSGKADFE LKDVMNNLGL
TFFKFEGDNI PRIFIVNSDR SETRARMWRF RDYMVIEGVH KKLHLRYKDS VLEVVNNDLG
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