| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0594 |
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| Symbol | topA |
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| ID | 3931799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 514673 |
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| End bp | 517156 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637900750 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_506474 |
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| Protein GI | 88608699 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTCC TCATAGTAGA ATCACCCACT AAAGGTAAGG CTATTGCTCA ATATTTGGGT
AAAGACTTTA GGGTACTGTC GTCCTTTGGT CATGTGCGAG CGCTTCCCAA TAAAAAGGGC
TCTGTTGATG TGACGGAGTC GTTCGAGATG CTCTATAAAC TTACCGATAC CGGTGAGACA
GTCGTGCCTC AGTTAATTAA GGATGTAAAA AAGGCGACAG CCCTCTATCT TGCTACAGAC
CCTGATAGAG AAGGGGAAGC TATTTCTTGG CACCTTGTTG AGGTGTTTAA GGAGAATGAT
GTGCTTCCCA AAGACGTACA CAGGGTTGTG TTTCATGAAA TTACAAAAAC CGCTGTGCAA
AATGCCATCG CTTCTCCAAG AAAGATAGAT GAGAATCTTG TTCGCGCACA AAGGCTAAGA
CAGGCACTTG ACTATCTTGT TGGGTTTAGT ATTTCTCCAG TGCTATGGAA GAAATTACCT
GGAAGTAAAT CTGCTGGGAG AGTTCAATCT GTTGCCCTCA GGATCTTGTG CGATAGGGAA
AACGAGATAG GTCTGTTTAC ACCAGAGGAA TATTGGACGG TAACTGTGAA TATGACCGAT
GGCGAAGCTC TTGTCCTTCC TACTCAACTT TCACACATGA ATGGTGAAAA ACTCGAGAGA
ATGTCTATAA GAAGAGCAGA GGAAGCTGAA AAGATTGTTG AGGAGATCAG TGGACTTCCA
TTTCTTGTTG AAGAAATCAA AAAGAAGGAA CTTAAGCAGA AGCCTAGTCC CCCATTTATC
ACGTCCACTA TGCAGCAAAC GGCATCAACC ATACTTGGGT TTAGTGTAAA AAAAACTATG
AGTCTAGCGC AAAAGCTGTA TGAGGGTATC GAGATAGGTG GTGTGATTGA GGGCCTCATC
ACGTATATGA GGACAGATGC TACTCATCTT TCTGTTGAGA GTGTTGATGC TATAAGAGAG
TTTATCCAAG AAAAATTTGG GCAAGAGTAT TTGCCTGCAT CTCCTGTTTT ATTTAAGAAA
AAAGTGAAAA ACGCTCAGGA AGCACACGAA GCTATTCGTC CAACAAGCAT TTTTCGTACA
CCTGAAGAAA TTGAATCTTA TCTCACACCA GATCAGTATA AGTTGTACAG GCTTATATGG
GAGAGAGCAC TTGCCTGTCA AATGAGTGAT GCTATTACGA GTAGTCAGAA CATCGTATTT
GTTTCTCAAG ACAAGAAGTT CAAAACTTCT GCGTCGGCAT CACTGCTTAT TTTTGATGGT
TTCAATGCTG CTTTTTCGCA TGGTAAAAAC AAAAATAAAA ATCAGGATGT TATAGATTTT
ATAAAGAAGC ATAAGGAAGG TGCTCAGGTA AAAGTAGGTG ATGTATTGCT TACACAAAAC
TTTACTGAGC CCCCACATCG CTACTCGGAA GCAGGGTTGG TCAAACATCT TGAGGAGTTG
GGTATAGGGC GCCCTTCAAC TTACGCTACT GTGGTTTCTG TTCTGCAGGA GAGGGGATAT
GCATCTATTG TCAACAAGTC GTTTATTCCA GAAAGCAGGG GAAGGCTAGT TTCTGAGTTT
TTGGTACATT TTTTTAGCAA ATATGTTGAG TATCATTTTA CTGCTGAATT GGAAGATAGA
CTGGACAAAG TCGCAGATGG AACAATTTTT TGGCTAGATG TAATTCAGGA TTTCTGGGAC
AGCTTTCATT CTAATGTAGA AGAGGTGGAA AAAGTTCCGA TCACTGAGGT TCTAGCATTT
GTAAATGGTG CCCTTGCAAG ACAAAAGCTT GTTTCGGCTG AGGTAAAGGT TGGTGACAAG
TGTCCAAAAT GTGAAAAAGG GTATATGCAT TTAAATGTAA GTCGTTATGG AGTTTTCCTT
GGCTGCACAG ATTATCCGGT TTGTAGGTTT ATAGTGAATA GTTATAGTAC TGATAATGAT
ACTGAATATC CTAAGCAAAT TGCTCAGGAT ATTAGCCTCC ACAAGGGTCC TTATGGTATC
TACCTTAAAT GCAAGGGCAA AAATAGTAGC ATACCAAAAG ATGTTGATCC CGTTTCTATA
GATGAAGAGT TTGCTCATAA AATCGCTTCC TTACCAAAAA TTCTTGGTAA ACACCCGATA
GATGGTAAAG AAATCAAGAT GGGTCTGGGC CCATATGGTC TGTATCTTTT TTGGAATGCA
AAATATTACA ACTTGCAGTT TTCCCAAATG GATGAAATGA CACTAGACCA AGCTGTTCAG
TTCATGGAGG ACTATGTTAG TCATGACAAG AGTTTGCTCC GTGTGCTTGG ATCCCATGAA
GGTGAAGAGA TACAAATTCG TGATGGGAGA TACGGTCCGT ACATTAAGTA TAGTAAGATG
AATGTTCCTA TACCGAAGGG GGAAAGTCCG GAGTCGTTGT CCCTTGAAAC GGCGATTCTT
CTCATTGAGA AAAAGAAAAA TACCTCTAAG TCCGCAAGGA AAGTAACAAC AAAGAGAAAG
GTCTTCACAA AAGAGAAGAA ATAA
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| Protein sequence | MNVLIVESPT KGKAIAQYLG KDFRVLSSFG HVRALPNKKG SVDVTESFEM LYKLTDTGET
VVPQLIKDVK KATALYLATD PDREGEAISW HLVEVFKEND VLPKDVHRVV FHEITKTAVQ
NAIASPRKID ENLVRAQRLR QALDYLVGFS ISPVLWKKLP GSKSAGRVQS VALRILCDRE
NEIGLFTPEE YWTVTVNMTD GEALVLPTQL SHMNGEKLER MSIRRAEEAE KIVEEISGLP
FLVEEIKKKE LKQKPSPPFI TSTMQQTAST ILGFSVKKTM SLAQKLYEGI EIGGVIEGLI
TYMRTDATHL SVESVDAIRE FIQEKFGQEY LPASPVLFKK KVKNAQEAHE AIRPTSIFRT
PEEIESYLTP DQYKLYRLIW ERALACQMSD AITSSQNIVF VSQDKKFKTS ASASLLIFDG
FNAAFSHGKN KNKNQDVIDF IKKHKEGAQV KVGDVLLTQN FTEPPHRYSE AGLVKHLEEL
GIGRPSTYAT VVSVLQERGY ASIVNKSFIP ESRGRLVSEF LVHFFSKYVE YHFTAELEDR
LDKVADGTIF WLDVIQDFWD SFHSNVEEVE KVPITEVLAF VNGALARQKL VSAEVKVGDK
CPKCEKGYMH LNVSRYGVFL GCTDYPVCRF IVNSYSTDND TEYPKQIAQD ISLHKGPYGI
YLKCKGKNSS IPKDVDPVSI DEEFAHKIAS LPKILGKHPI DGKEIKMGLG PYGLYLFWNA
KYYNLQFSQM DEMTLDQAVQ FMEDYVSHDK SLLRVLGSHE GEEIQIRDGR YGPYIKYSKM
NVPIPKGESP ESLSLETAIL LIEKKKNTSK SARKVTTKRK VFTKEKK
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