| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0583 |
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| Symbol | rpsD |
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| ID | 3931527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 507288 |
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| End bp | 507905 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637900739 |
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| Product | ribosomal protein S4 |
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| Protein accession | YP_506463 |
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| Protein GI | 88608362 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAACTA CGATAAGACG AAAGTTCAGA GTAAGCAGGC AGATGAAGGC AAGTCTCTGG
GGGTCGCAGA AGGATCCAGT GCATAAGAGG AATTATGCTC CGGGACAGCA TGGTAGGGCC
CCGGTAAAGA AGATTTCGGA TTTTTATAAG CAGAACGCTG CGCAGCGTGC TTTTAGAACT
TACTATGTTA TTGGAAAAAA GCAGTTCGCG AACGTGTTCA GTAAGGCCTA TAGGGGTAAG
GGCAATACGA ACGATAATTT AATTTCTCTT CTTGAAAGCC GTGTTAGCTC AGTTCTGTAC
AGGTCTGGTA TGGTTCCGAC GATTTTTGCT GCTAGACAGT TGATATCGCA CAAGCATGTT
ACCGTTAATG GGGAAATAGT AAACATTTGC AGCTTTACCT TGAAAGAGGG GGATGTCGTC
CAGATAAGGG ATAGGGCTAG CAATATTCCT TGTGTTGTTG CCGCACTTAA TTCGAATTCT
GAAAGTCCAC ACTATTTGGA AGTGGATAGA GAAAAGAGAT CTGTTAAACT GCTGGTTTTG
CCAAAGTTTG AGGATGTTCC ATATCCTGTT GTAATGGAGC CGAACTTGGT GACCGAGTAT
TTTTCCAGTA AGATGTGA
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| Protein sequence | MTTTIRRKFR VSRQMKASLW GSQKDPVHKR NYAPGQHGRA PVKKISDFYK QNAAQRAFRT
YYVIGKKQFA NVFSKAYRGK GNTNDNLISL LESRVSSVLY RSGMVPTIFA ARQLISHKHV
TVNGEIVNIC SFTLKEGDVV QIRDRASNIP CVVAALNSNS ESPHYLEVDR EKRSVKLLVL
PKFEDVPYPV VMEPNLVTEY FSSKM
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