| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0540 |
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| Symbol | ffh |
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| ID | 3931977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 469013 |
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| End bp | 470362 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637900696 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_506423 |
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| Protein GI | 88608106 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.733534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATT CACTTTCTAA AAAAATTGGT GGTGCACTGG ATGGAATAAA GAATAGAGGG
GTGATTACCG AAAAGGAGTT TGACGATTTT GTTCGGAAGT TGCGTCTGAC GTTTCTCGAG
GCAGATGTTA GTCTGCCTGT CACTAAACAG TTTATCGCAA ATGTAAGGGA ATCGGTTATT
GGAAAGTCTC GTGTGAAAGG GATCTCGACA CCAGCGGTAA TTGGAAGTGT TGTAAAAGAG
GAATTAGTAA AAATTTTGGG AGGTGAATCA CAGAAATTTG AATTCCCGAA ATTTGGGAAA
CAGATATTGA TGTTTGTTGG TTTACAGGGA GTTGGGAAGA CTACAACTGC AGCAAAGTTA
GCTCTGTTGA TTCGGAAAAA ATTTAAAAAA AATATTCTTT TATCTTCTGT AGATATCTAT
AGGCCTGCAG CGAGGAAACA GCTTGAAATT CTTGCAAAGC AAATTGACGT TGATACTGTT
CCTATAGTGG AAGGTGAGGA TGTCGATGCG ATCGTAAAGA AAACATTAGA TTTATTTAAT
AATAGCCATG AAGGTTATGA TGTGCTTATG GTTGACACTG CCGGACGTTC GCAAATTGAT
TCTGTGCTTA TGGAAGAGCT AAAAGTGATT AAGAATCGCT TACAGCCCTC CGAGATATTT
CAGGTTCTAG ATGCGATGAT GGGGCAAGAT TCACTTAATG TTGCGAGGAC ATTTCACTCA
GAGATCGGTA CAACTGGGGT AATAGTGAGC AGGCTAGACA GCGATGCGCG GGTTGGTTCA
GTGCTTTCAG TTAGGCAATC TGTTGGTCTT CCTATTAGAT TTTGTGGCGC TGGAGAGAGG
GTTAATGATT TAGAAGAATT TCACCCGGAA CGTATGGCAG GAAGAATAAT GGGAGCTGGG
GATATTGCCT CCCTAGTTGA ATATGCCTCG TCTGAAGTTG GTGAAGAAAG AATAGGTTCT
ATAAGAAAAA GAATCGAAGC TGGTAAGTTC GATTATGATG ATCTTGTGTT GCAGTTGAAA
AGCATTGACA AGCTTGGCGG AATAGCTAAA CTCTTACGTT TTATTCCCGG AATTAATAAA
GTTCCGACGG AGCATCTTGT CGATGATACA ACCCTGAAGA AAAATCTGGC CATGATAGGC
AGTATGACAA AGAGGGAAAG AGCGTGTCTC GATTCCATCA ACCAGTCACG CAAATCACGC
ATAGCGAGTG GGGCAGGAGT TAAGATATAC GAAGTGAACA AGTTAATAAA AAACTTTGAG
AAAGCTCGCC TGCTCGCCCT AAAAATAGGA AAAGTAGGTG CAACAAATGA GAAATCCATA
CACGACCTCA ACGAACTACT CAGGAAATAA
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| Protein sequence | MFDSLSKKIG GALDGIKNRG VITEKEFDDF VRKLRLTFLE ADVSLPVTKQ FIANVRESVI
GKSRVKGIST PAVIGSVVKE ELVKILGGES QKFEFPKFGK QILMFVGLQG VGKTTTAAKL
ALLIRKKFKK NILLSSVDIY RPAARKQLEI LAKQIDVDTV PIVEGEDVDA IVKKTLDLFN
NSHEGYDVLM VDTAGRSQID SVLMEELKVI KNRLQPSEIF QVLDAMMGQD SLNVARTFHS
EIGTTGVIVS RLDSDARVGS VLSVRQSVGL PIRFCGAGER VNDLEEFHPE RMAGRIMGAG
DIASLVEYAS SEVGEERIGS IRKRIEAGKF DYDDLVLQLK SIDKLGGIAK LLRFIPGINK
VPTEHLVDDT TLKKNLAMIG SMTKRERACL DSINQSRKSR IASGAGVKIY EVNKLIKNFE
KARLLALKIG KVGATNEKSI HDLNELLRK
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