| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0521 |
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| Symbol | nusA |
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| ID | 3931612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 444417 |
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| End bp | 446030 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637900677 |
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| Product | N utilization substance protein A |
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| Protein accession | YP_506405 |
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| Protein GI | 88608874 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTTT CCAATAATGG ACTCAGTAAT CTCCAAATTG TGGAATCCAT AAATTCTGTC
GCAGAAAAAG AGGGACTTAG TCCTGATACT CTGTTTCGCG CGATAGGAAT CGAGTTAGCA
CATGAAATAG GAAAAAGGCA GTATGGAGAC CATAGAATTT TTGTTGAGAT AGACAAAAAA
AGTGGTGAGA TACTTGTATC AAAGCGACTT CTTGTAGTCG AAGATTCTGA TAAAGCTCGT
ATGCTTGAGC AGATGGAAGT TACTACCGAA GAGTCCGACG ATTTGCCTTC CTCATTTCGT
GCGGAGGAAA AGGTTCATTA TGATGGTGTA ATCGACTTGT CAACTGCAAG GCTCAAGTAC
CCGAGTATTG AGCACAAAGC GGGCGATATA ATCACAGAAC ATTTACCTTC ATTTTCTTCT
GGATACATAA TTGCCAGAGT CATGAAAGCG AAGCTTGAGC GCCTCATTAC CTCATTAGTG
AGGGAAAAAC AGTATCACTG TTACAAAGGC AGAGTTGGTG AAATTGTTAC AGGCATCGTG
AAAAAATCCA TTGATTTTAA GACGGGTAGC CGAAGCATTA TCGTCGATAT CGCAGGAGTG
GAGGGCCTTT TACCTTATTC ATCACTAGTA AAAGGGGAGA GCTTTAGGCC TGGGGAAAGA
GTCAAGTGTG TTATACAAAA AGTTGAGTAT TCAGTTGTCA AACCTCAAAT CTTGCTCTCT
AGGTCTAGTG GCAGTTTTGT CGCTCAGCTC TTTTCTCAGC AGGTGCCAGA AATATATGAT
CGTGTAGTAG AAATAAGGAA AGTCGCCAGA GATGCTGGCT CCAGAAGCAA GGTCGCTGTT
TTTTCATCGG ATAGAAACAT AGATCCAGTT GGAGCATGTA TTGGCATGGG TGGAAGTAGA
ATAAACGCCG TAGTAAACGA GTTGCACGGT GAAAAGATAG ATATAGTCGA ATATTCGAAC
GATACTGCCA CCTTCCTAGC CAATGCCCTT AAACCAATCA GACCAGTTAA GATTACTGTA
AACGAAGAGA CAAAAAAAAT AGAACTAGTT GTCCCTGATG AAAGTGTCAG CCTTGTTATA
GGACGCGGTG GGCAGAATGT ATACTTGTTA TCCTCTCTCC TTGGATATCG TGTAGAGGTT
CTCAGTGATG CCGAATTTTC CAAAAAGAAA ATGGAAGAAT TCATTTCGGG GACCGCACGC
TTTGTAGAAG CCCTGAATGT CGAGGAAGTA ATAGCTCAGC TATTGGTTAC TGAAGGATTC
TCAACGGTTG AAGAAATCGC TGACTGTAAT ACGTCAAGGC TGGCCTTCAT TGAGGGGTTT
GATAAAGATA TCGCTGAAGA GATAAGGAGT AGGGCGGTTG AATATGTGAA TGAGCAACCT
AAGAGAGTAC GGGCTCTGGC AGAAAAGTAT AAAGCAAATC CGAATATGCT TGCCCTTTCA
AGCTTTGACA CGGGATTACT TGAGGTACTT TTCTCATCTG GACTGACGGA TCTTGAAAAG
GTTGCCGAGT TGTCTTGTGA TGAATTAAGA GAGGTCATTG GAGATAATGG ATTTGGTGTG
CCGTTGCTAG AACAGCTTAT CATCAGATCA AGGAAGACTC TGGGTTGGTT ATAG
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| Protein sequence | MSFSNNGLSN LQIVESINSV AEKEGLSPDT LFRAIGIELA HEIGKRQYGD HRIFVEIDKK
SGEILVSKRL LVVEDSDKAR MLEQMEVTTE ESDDLPSSFR AEEKVHYDGV IDLSTARLKY
PSIEHKAGDI ITEHLPSFSS GYIIARVMKA KLERLITSLV REKQYHCYKG RVGEIVTGIV
KKSIDFKTGS RSIIVDIAGV EGLLPYSSLV KGESFRPGER VKCVIQKVEY SVVKPQILLS
RSSGSFVAQL FSQQVPEIYD RVVEIRKVAR DAGSRSKVAV FSSDRNIDPV GACIGMGGSR
INAVVNELHG EKIDIVEYSN DTATFLANAL KPIRPVKITV NEETKKIELV VPDESVSLVI
GRGGQNVYLL SSLLGYRVEV LSDAEFSKKK MEEFISGTAR FVEALNVEEV IAQLLVTEGF
STVEEIADCN TSRLAFIEGF DKDIAEEIRS RAVEYVNEQP KRVRALAEKY KANPNMLALS
SFDTGLLEVL FSSGLTDLEK VAELSCDELR EVIGDNGFGV PLLEQLIIRS RKTLGWL
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