| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0406 |
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| Symbol | prfA |
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| ID | 3931950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 329625 |
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| End bp | 330728 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637900562 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_506293 |
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| Protein GI | 88608013 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.795353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATC TTTGGGGAGT TCTGGAAGAG ATTCTAAATA GGCATACATA CCTTGCAGAC
AGGTTACGCT GTCCGGAAGC TATAGCTTCT CAGGAGTTTT CAAAGCTTTC TAAGGAGTAT
GCGGAGCTTA AGCCAAAAGT TGAATTAATT GCTAGATATA AAAAATTGAA AGAAGAACAG
GCCTATCTAG AACTGTTGGT AAAAAATCCA CTGGAGGATC AGGAGATACG TGAAATAGGG
AAGTCTGATC TGCAAGCAAT CCAAGATGTG ATACCAAAGC TCGAGTTAGA AATAAAAAGG
ATGTTGCTAC CAAAGGATAA AGATGACGCT TTGAACGTCA TGCTGGAAGT GAGGGCTGGC
ACCGGTGGTG ACGAAGCTGC ACTTTTTGCA GCGAGTCTCT TCCATATGTA TCAAAAATAT
GCAGAGCGCA TGAAGTGGCG CTTTGAGATC ATTAGTATTT CCCATAATGA GATAGGTGGA
TACAAAGAAG CCAATGCTAG TATAAGTGGA TCTGATGTTT TCGCAAAGTT AAAGTTTGAG
TCTGGCGTGC ACAGGGTTCA GCGTGTTCCA GAAACGGAGA GTGCTGGACG TATACATACT
TCAACAGCCA CTGTTGCTGT ACTCCCAGAA CCCGAAGATG TAGATGTAAA AATCAACGAT
AAGGATCTAC GTATCGATGT GTATCGGTCT AGTGGTCCTG GAGGACAGTC TGTCAACACA
ACTGACAGTG CAGTTCGTAT TACACACATT CCGACCGGCA TAGTAGTTAT ACAACAAGAC
GAGAAATCCC AACATAAGAA CCGTGCTAAG GCAATGAAGG TGCTCAGAGT AAGATTGTAT
GAAATAGAGC GCAATAAAGT TCAACAAGAG ATTTCGTCAA TGAGAAAGTC GCAGATTGGA
TCGGGTGAAC GCTCTGAAAA AACTAGAACA TACAATTTCC CACAGGGCAG GATAACTGAT
CACAGGATCA ATTTAACTAC TTATAGGATT AATGAAACGG TAAAGGAGGG CGAACTGGAA
CCAATTATTG AAGCACTTAT TAGAGAAAAT GAAGCTCGTA TGTTAGCTGG TGTCGAGGTA
GGCTTCAGCG GAGATAAGTC TTGA
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| Protein sequence | MDNLWGVLEE ILNRHTYLAD RLRCPEAIAS QEFSKLSKEY AELKPKVELI ARYKKLKEEQ
AYLELLVKNP LEDQEIREIG KSDLQAIQDV IPKLELEIKR MLLPKDKDDA LNVMLEVRAG
TGGDEAALFA ASLFHMYQKY AERMKWRFEI ISISHNEIGG YKEANASISG SDVFAKLKFE
SGVHRVQRVP ETESAGRIHT STATVAVLPE PEDVDVKIND KDLRIDVYRS SGPGGQSVNT
TDSAVRITHI PTGIVVIQQD EKSQHKNRAK AMKVLRVRLY EIERNKVQQE ISSMRKSQIG
SGERSEKTRT YNFPQGRITD HRINLTTYRI NETVKEGELE PIIEALIREN EARMLAGVEV
GFSGDKS
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