| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0340 |
|---|
| Symbol | |
|---|
| ID | 3931507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | - |
|---|
| Start bp | 278854 |
|---|
| End bp | 279351 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637900496 |
|---|
| Product | DsbB family disulfide bond formation protein |
|---|
| Protein accession | YP_506229 |
|---|
| Protein GI | 88608168 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1495] Disulfide bond formation protein DsbB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00348153 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAGC ATCTCCCCTC CTCAGACAGA TTGGTCGCGA TTTCGCTTCT TGTGCCTTCT
TCGCTGGCCC TGCTCCTGGC TGTAATCTTG CAATATGGAT TTCATTATTA TCCCTGTACC
CTTTGCATAT ATGAAAGATG GCCTTATTTT ATTAGTATGA TAATAGCCAT CGGACTTCTT
TTAATGGAAA ACGGAAATCG CTTTCTCATC TACTTTGCTG TGGCATCACT TTTTTTAGGC
ACACTGATAA CGCTCTACCA CATAGGAATA GAGAAGCACA TTTTCACCAT GGCAGAAAAT
TGTGCTACCA CATACCATGA TACACTTGAT ATTGCTAATC TATATGAACA AATTGCCACA
AATGAAATAG TACGTTGTGA TAATCCACAA AAATTACTTG GAATACGTTT GACTTATTTA
AATCTGTTGT ATTCTCTAGG GAGTGCACTT TTGGTAATTT TTGCGTGTAT TAAAAATGAA
AGCCGGTCCG CTAATTGA
|
|---|
| Protein sequence | MHKHLPSSDR LVAISLLVPS SLALLLAVIL QYGFHYYPCT LCIYERWPYF ISMIIAIGLL
LMENGNRFLI YFAVASLFLG TLITLYHIGI EKHIFTMAEN CATTYHDTLD IANLYEQIAT
NEIVRCDNPQ KLLGIRLTYL NLLYSLGSAL LVIFACIKNE SRSAN
|
|---|
| |