Gene NSE_0307 details

Gene Information

• Locus tag: NSE_0307
• Symbol: pth
• ID: 3931915
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: +
• Start bp: 250381
• End bp: 250965
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637900463
• Product: peptidyl-tRNA hydrolase
• Protein accession: YP_506197
• Protein GI: 88608638
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0193] Peptidyl-tRNA hydrolase
• TIGRFAM ID: [TIGR00447] peptidyl-tRNA hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGAGT TTCGCACGTT TGTTCTGTGT GGCTTGGGTA ACCCGGGACT GCGGTATGCG 
CAGACGCGGC ATAACCTTGG GTTCATGCTT ATTGATTACG TTAGGTATAC CTTTTCTTTT 
CCGGAGTTTC TTCCGAAATT TTCAGGGCTC TTGTCTTCGG GACGGGTCTC TTCCTTTCTT 
TTGTACTTAT TCAAGCCAGT AGCCTTTATG AATAATTCAG GTAGGCCGCT CGTACAGCTG 
GTCAACTTTT ATAAAGTTGA GCTGGAGAAT GTAATTGTCT TTCATGATGA TATAGATCTT 
GATTTTGCCA AAGTGAAGAT AAAAAGGGGT GGAGGCTCTG GAGGTCATAA TGGACTGAAA 
TCTCTTGATT TTAACTTGGG TAGAGATTAT TGGAGGTTTC GCTTCGGTGT TGGAAGAGGT 
GTTGGTGACC CGGCTGAACA TGTTTTGTCA CGTTTTACTG CGTTGGAGTT GGAGCGTCTG 
AATAAGTTAT TTGGATTTAT TGGTACGAAT CTTCCTCTTC TTTTAAGTGA TATTGCTACG 
CGCAAAGAAA AGTTCCTCAA TGAATACAAG TGCTGCAGTC AGTAA 

 

Protein sequence

MSEFRTFVLC GLGNPGLRYA QTRHNLGFML IDYVRYTFSF PEFLPKFSGL LSSGRVSSFL 
LYLFKPVAFM NNSGRPLVQL VNFYKVELEN VIVFHDDIDL DFAKVKIKRG GGSGGHNGLK 
SLDFNLGRDY WRFRFGVGRG VGDPAEHVLS RFTALELERL NKLFGFIGTN LPLLLSDIAT 
RKEKFLNEYK CCSQ