Gene NSE_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0305 
Symbol 
ID3931506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp248179 
End bp249813 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content41% 
IMG OID637900461 
Productputative transporter 
Protein accessionYP_506195 
Protein GI88608167 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1178] ABC-type Fe3+ transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGG TACTGCTTAA TGGACTGATT CTCCTATTTT TTGCTCCTAC ACTTTCACTG 
ATTCTACCAT CATTCAGTGC ATACGGGTTT GGCTGTGCTT CTTGTCGGTT ATTTGGTGAG
TACCTACTCA ATACTCTTGT ACTACTTTCT GGGGTGGGCT TTTTAACTTT TGTTTTTGGA
GTTGGTTCTG CTTGTGCCGT GACGTTTTTG CGCTTTCCAG GTCGGGAGCT GCTAAGAATG
CTGTTATTTT TCCCGATCGC TGTCCCAGGC TACATAATGG CGCTTTCCTA TGTGCAGTTC
TTTGGATTTT CTTCTGAGTT TTCAAGTTTC TTTAGGGATG TTCTTGGTGT GCAGCACTTA
CTGAGAATCA ACTCTTTATA CGGAGCGATT TTTGTTATGA GTGTTGCCTT TTACCCATAT
GTTTACATAT TGTGTTTAGC TAGGATTTCT TCCATTGGCG GGGCAATAGC AATAGCAAGA
AGCTGCGGAA AATCTTTTCT TTCCACTATG TTAGAGGTTG TGATTCCAAT AGCGAGACCA
GCCATTGTTG GTGGAATCAC ACTCGTATTG ATGGAAGTGG TTTCGGACTT TGGAATAATG
CAATTTTTTG GTCTGCAGAC ATTTGTAACT GGTATATACA GGAAGTGGTT CCTACTGAAT
GATGTCATAG GTGCATCGAG GTTGGTTCTA TTTTTGCTAC TGTTTGTCGT AGGAATAATT
TTCCTTGAGA AACTTCTAAG ACAGGGTGCT GTTTATTCTA ATGTCATGGG GGACCCACGT
GCAGGCTTTT GTTGGCACAT TAAGGGCTAT AAAGCCGTTG TCGTTCCGCT TTTACTTTTC
TTACTTCCGC TTTTTGGTTT AATTTTTCCA ATAGTTTCGC TCATGATTTT AAGTGTTGGT
GCCGTTCCAG ATTATAGACT TCTATCTCTC GCTTTTGAGA GTATCCAGAT TGCCTTGATA
GTTTCTTTCT TTACGATTCT AGTTGCGTCT TTTTTCGTAT ATATGGAGAA AAAGAAAAAG
ATAGGGGCAA CAGCCTTTCA GCTGTCTAAT TTGGGATACT CGGTTCCTGG ACTAGTTGTA
GGAATGGGCA TAATAAACTT TTTTGCTAGC GGTTCGTCAT TTCTATCATA TATACCACTA
CCAGGATTAC ACCTTTTTAC TATTGGGACC TTTACAGCGT TGGTTTATGC ATACGTCTTT
CGGTTTCTTG CCCTAGGTTC TAACAGCATA AAATCTGGCA TGGAAAAAAT ACCCAATGAG
ATTCCTTGGA CGATGAGGCT TGTAGGAAAA AGTGGTTTCA TCGACACAGT GTGCGTTTAT
TCGCCAATGT TGGTCGGGTG TTTGGTGAGT GCTGCCATGT TTATTTTTCT TGATACGTTT
AAAGAACTGC CATTGACTTT ACTTGTTAGA CCCTTCAATT TCGAGACAAT GTCCACTCGT
GTATACGAGC TTGTCATGGA TGAAAGATAT GAAGATGCTG CTATGCCAGC ACTCATAATG
ACGGCTATAT GTATTGCAAT AACGTGGCTT CTTACGCGCG GTACGTACGC TGGAGATTTG
CATAATCTTA AAAAACGATC TAGAATCGGG TGTTTCTGCG ATGTTTGCTT AGGTAAGAAT
GGTTGTTTCG ATTGA
 
Protein sequence
MQKVLLNGLI LLFFAPTLSL ILPSFSAYGF GCASCRLFGE YLLNTLVLLS GVGFLTFVFG 
VGSACAVTFL RFPGRELLRM LLFFPIAVPG YIMALSYVQF FGFSSEFSSF FRDVLGVQHL
LRINSLYGAI FVMSVAFYPY VYILCLARIS SIGGAIAIAR SCGKSFLSTM LEVVIPIARP
AIVGGITLVL MEVVSDFGIM QFFGLQTFVT GIYRKWFLLN DVIGASRLVL FLLLFVVGII
FLEKLLRQGA VYSNVMGDPR AGFCWHIKGY KAVVVPLLLF LLPLFGLIFP IVSLMILSVG
AVPDYRLLSL AFESIQIALI VSFFTILVAS FFVYMEKKKK IGATAFQLSN LGYSVPGLVV
GMGIINFFAS GSSFLSYIPL PGLHLFTIGT FTALVYAYVF RFLALGSNSI KSGMEKIPNE
IPWTMRLVGK SGFIDTVCVY SPMLVGCLVS AAMFIFLDTF KELPLTLLVR PFNFETMSTR
VYELVMDERY EDAAMPALIM TAICIAITWL LTRGTYAGDL HNLKKRSRIG CFCDVCLGKN
GCFD