Gene NSE_0278 details

Gene Information

• Locus tag: NSE_0278
• Symbol: rplE
• ID: 3932054
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: +
• Start bp: 229652
• End bp: 230185
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637900434
• Product: 50S ribosomal protein L5
• Protein accession: YP_506169
• Protein GI: 88608220
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0094] Ribosomal protein L5

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000073879
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGAAA GTGAATATCA TAAAAGTGCG TTAGCAAGGG TCATGAAGGA GGTTGGAGTG 
GACTCCCCTG TAAAGGCCCC AAGGTTTGAG AAAGTGTGTC TAAGTGTTGG ACTAGGTGGT 
GCTAGCAGTG ACAGTAAGCT TTTAGCTTCT GCTGTGGAAG ATTTGTCTCT CATAGCTGGG 
CAGAAGGCTG TGGTGACGGT TGCGAAAAAG TCCATATCTT CTTTCAAGTT GCGCAAGGGT 
TTTCCGGTTG GTTGCCGGGT CACTCTTCGC AAGAGGAGGA TGTTTGATTT TATAAACAGG 
CTATTATACA TGGCCTTACC CGATCAAAAG GATTTTAAGG GATTTACGAT GAGAAATTTT 
GACGGGCATG GTAATATGGC TTTCGGTTTG ACGGAACACA TCGTCTTTCC TGAAGTAGAT 
TTTGATAAAA CTTATCGGAT AATCGGGATG AATGTGGTTG TAGTGACAAC GGCTTCTACT 
GATCAGTTAG CACGAATCTT ATTGTCTTGC TACGGGTTTC CGTTCAGGGA TTAG 

 

Protein sequence

MLESEYHKSA LARVMKEVGV DSPVKAPRFE KVCLSVGLGG ASSDSKLLAS AVEDLSLIAG 
QKAVVTVAKK SISSFKLRKG FPVGCRVTLR KRRMFDFINR LLYMALPDQK DFKGFTMRNF 
DGHGNMAFGL TEHIVFPEVD FDKTYRIIGM NVVVVTTAST DQLARILLSC YGFPFRD