| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0172 |
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| Symbol | |
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| ID | 3931423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 141195 |
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| End bp | 142610 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637900328 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_506067 |
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| Protein GI | 88607979 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02924] isocitrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAGT TGACAGTAGC GTACGGTGAC GGAGTCGGAC CAGAAATAAT GACATCGGTG
CTCGAAATTA TTTTTGAGGC TGGTGCAGAA ATACAGATTG ATACAATTGA AATTGGACAG
AAGATTTATG AAAAAGGCTG GCATTCTGGG ATTTCTGACT CCGGATGGGA AACCCTCAAG
AGAAATAAAG TACTCCTAAA AGCACCGATA ACAACTCCTC GCGGAGGGGG TGTAAGAAGT
CTTAACGTAA CGCTCAGAAA GAAGCTAGGA CTGTTCGCCA ATATTAGACC CTGCAAATCG
CACTTAGAAT GGCAAAGCCC TAAAATGGAT ATCGTCATTA TCCGAGAAAA TGAGGAAGAC
CTCTACTCAG GGACAGAATA CAGACAGACC CTCGATACAT ACAACTGCAC TAAGGTTATT
ACAGAAAGTA CATCTGAGCG GATTTGTAGA TATGCTTTCG AATACGCACG CAAAAACGGC
AGAAAAAAAG TCACCGTAAT GGTGAAAGAT AATATCATGA AACTGACTGA TGGAATCTTT
CACAAACTGT TTAAGAAGGT CGCGCTTGAG TATCCAGATA TCGAGAGTGA AAACTACATT
ATAGATATAG GGGCAGCAAG AATAGCAAAA AACCCTGAAA AATTTGATGT GATCGTCACG
CTTAACCTAT ATGGAGACAT TATTTCGGAC ATTGCAGCAG AAATTTCAGG ATCAGTGGGT
CTTGGAGGTA GTATCAATAT AGGCGAAGAA TACGCAATGT TCGAGGCTGT ACATGGTTCT
GCACCTGACA TAGCAGACCA AGACATTGCA AATCCTTCCG GACTTTTGAA CGCCGCAATG
TATATGCTCA GTTATATAGG ACAGAAGGAA ATTGCACAAA AGGTCTATTC TGCATGGTTG
AAGACACTAA AATCAGGTGT ACATACCGCG GACATTTTTA ATCCTTTGCA CAGCAAGCTC
AAGGTTGGCA CTAAAAAGTT TACAGAACAC ATAATTCACA ACATCGACAG AAAAAGTTTG
GTAGCTTTCT CATGTAACAG TCTGGTCGAA GGTGTACTTC TTAAACCCCG ATACCAGAGT
AAGAAGGAAA AAGTTCTAAT CGGTGTGGAT CTCTTTATTA GCTGGGATAG TACAAATTTA
GCAGCCCTTT TGGCTGCTTT AGAAAAAATA AAAGTAGACG ATGTGATAAT CCTGGGTAGC
ATAAGCGTCA AAGGCGTCTT GATTTGGCCA GAAGAAACAG CCGTCATGCC CTACAGTGAC
ACTCTTTGTT GTAGATTCTT GGCAGAACCC AATAAGAGTC TAGCCACAAC AGTTATCTGC
GGTCTAATAA GTGAACTAGA AAATTCAGCA ATAGAGGTCA CCAAAATGGA GAAACTTTAC
TCCTTTGGCG ATGAAGCGGG GTTTTCAAAT ATTTAA
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| Protein sequence | MPKLTVAYGD GVGPEIMTSV LEIIFEAGAE IQIDTIEIGQ KIYEKGWHSG ISDSGWETLK
RNKVLLKAPI TTPRGGGVRS LNVTLRKKLG LFANIRPCKS HLEWQSPKMD IVIIRENEED
LYSGTEYRQT LDTYNCTKVI TESTSERICR YAFEYARKNG RKKVTVMVKD NIMKLTDGIF
HKLFKKVALE YPDIESENYI IDIGAARIAK NPEKFDVIVT LNLYGDIISD IAAEISGSVG
LGGSINIGEE YAMFEAVHGS APDIADQDIA NPSGLLNAAM YMLSYIGQKE IAQKVYSAWL
KTLKSGVHTA DIFNPLHSKL KVGTKKFTEH IIHNIDRKSL VAFSCNSLVE GVLLKPRYQS
KKEKVLIGVD LFISWDSTNL AALLAALEKI KVDDVIILGS ISVKGVLIWP EETAVMPYSD
TLCCRFLAEP NKSLATTVIC GLISELENSA IEVTKMEKLY SFGDEAGFSN I
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