Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0165 |
Symbol | hflC |
ID | 3931780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 132657 |
End bp | 133517 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637900321 |
Product | HflC protein |
Protein accession | YP_506062 |
Protein GI | 88608777 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00225021 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGGAG TTTTAGCAGT TGTTATAGGC TTTTTTTTGC TGTTGAATCT CAGCGTGTTT GTGGTTCCCG AGGGGTATAA AGCTATAGTT TTACAGTTCG GTGAGGTGGT AACTGAAAAG CCACTTGAAC CAGGTTTGCA TTTTAAGATC CCGTTCATCA ATAAAGTCAT AGTGATCGAT ACTAGGATAC AGGACTTATC ATCCGATTCT AGGGAGGTCA TCGCCGCTGA TCAAAAGAGA TTGATAGTTA GTTACTACGC GAAATATAAG ATTATAGATC CCGTACAATT TTATCGCTCT ACTAGGAGTA TAGCTAATCT TGAGAGTAGG TTGGCTCCAG TGGTTGAGGC AAATATGAGA GAACAGATAG GTCTGGTACC TCTTGTCAGT ATTCTGACTG AGGAGAGAGC AGATGTGATG AACAAGATAA AATTGCATTC TGGAAATGTT GCGTCAGATT TTGGGGTCGC TGTAGTAGAT GTTCGCATCA AAAGGACTGA CCTTCCGGAA GAAAATAGTG ATGCGATCTT TAAAAGGATG CAAACAGAGC GAGAAAAAGA AGCACGTGAA ATAAGGGCAC GGGGTTACCA AGAAGCGCAG AAAATAATCG CGAATGCTGA TAGGGAGAAG AAAGTCATTC TAACTGAAGC ATATGCAAAG GCGCAATCGA TCAAAGGTGA AGGTGATGCT GAGGCTGCTA AACTATACGC GGAGGCGTAT GCAGTTGATC AAGATTTCTA TAAGTTTTAC AGGACGATAA TTGCCTACAG GAAGGTTTTT AGTCGGGGTA ATACAAAATT TATTATCAAC TCGAGTGATG AGTTTTTGGC TACATTGAAG GATGTTAATG AGAAGAAATA G
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Protein sequence | MRGVLAVVIG FFLLLNLSVF VVPEGYKAIV LQFGEVVTEK PLEPGLHFKI PFINKVIVID TRIQDLSSDS REVIAADQKR LIVSYYAKYK IIDPVQFYRS TRSIANLESR LAPVVEANMR EQIGLVPLVS ILTEERADVM NKIKLHSGNV ASDFGVAVVD VRIKRTDLPE ENSDAIFKRM QTEREKEARE IRARGYQEAQ KIIANADREK KVILTEAYAK AQSIKGEGDA EAAKLYAEAY AVDQDFYKFY RTIIAYRKVF SRGNTKFIIN SSDEFLATLK DVNEKK
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