| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0156 |
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| Symbol | alaS |
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| ID | 3931384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 124722 |
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| End bp | 127268 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637900312 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_506054 |
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| Protein GI | 88608446 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGACG GCCTCAGAAA AAAATTCATA GATTTTTTCG TCAAAAACGG ACACACATAC
CTTCCTTCTG CATCCTTAGT ACCGAAAGAC GATCCTTCAC TGATGTTCGT CAACGCGGGT
ATGGTTCCAT TTAAGGAGTA CTTTGTGGAT GTCAGAAGAG CACCATTCTC GAGCATCGTA
ACAGCACAAA AATGCGTGAG GGCTGGAGGT AAACACAATG ACTTGGAAAA CGTTGGATTT
ACAAAACGGC ACCACACCTT TTTTGAGATG CTGGGAAATT TCAGCTTTGG CTGCTATTTC
AAGGAAAGAG CAATAGAGTT AGCTTGGAAA TTTGTCACTG AAGAACTCAC GTTAAGTAAG
AAAAAACTGT ACATTACAGT CTACCACGAG GACGATGAAG CGTTCGAGAT TTGGGATAAA
TTAACAGGCT TCGGGGAAAG AAAAATCAAG AGAATTAGCA CAAGTGATAA TTTCTGGCAG
ATGGGTGATA TTGGCCCGTG TGGTCCCTGC TCAGAGATCT TTTATGACCA TGGAGAACAC
TTATCCGGTG ACATACCTGA AGATAAAAAG GACCCCGGGG AAAGATACGT CGAGATATGG
AACCTCGTTT TCATGCAGTA CATAAGGGAA CAAAGCGGAG AACTGGCGCG CATGGAGTGT
CCGTGTATAG ATACAGGAAT GGGGCTAGAA AGGGTGGCCG CAATTCTAGA GGGTACAGAT
GATAACTATA AAACAAAATT GTTCGAAGCC ATTGTAAAGG AATCACAAAA TGTTACCGGC
AACAAAGACA ATCAAGCTGC GCACAAAGTA ATAGCCGATC ATTTACGTTC TGCTAGTTTT
CTTATAGCGG ATGGTGTTTT ACCAGGTAAT ACTGGACGTG AGTATGTCTT GAGGAGAATA
ATACGCAGAG CAGTACGGTA CTCGCATGCA CTTGGTTTTG ATACGGTATT ATTACCAAAG
CTTTTTTGGG TACTTAAGGA GTGGATGGGT AGTCATTACC AGGAACTCAC AAGAGCTGAG
AATCTCATTT TAGATACATT AACACTAGAA GAACAATCTT TTCGAAACAC ACTCAAGTCA
GGAATGAAAT TACTCGAGGA AGTTTCAAGC TCTATGAAGG AGGGCGATAC ATTATCTGGA
GACATAGCAT TCACACTATA TGATACCCAC GGATTCCCAT TGGATATAAC GGTAGACATC
TTAAAAGAGA GAAAAATTTC AGTCGATGAA GAAGGTTTTG CAGAAAGGAT GAAAATGCAA
AGGCTCCTTG CTCAAGCTTC TCGGATGAAG GATATGGCAC AAACCTCAAG TTATGAGGTA
AAAGCAGTGT TCCTAGAGCA CGGAAAAACA CCTTTTATTG GTTATGAAAA TTTTACAGGA
TTAGCGCTTA TCCTTGCGAT AACAGAAAAA GAGGGATCTA ACAAACTGAC AATTATACTT
GACCAAACGA TTTTCTACCC AGAATCAGGT GGTCAAGAGA GCGATCAAGG CATAATAGAA
GGAGAAAATA CCCTGCTGAA GGTAGAAAAA GTCTACAAAT CTACTGAGGG AGTTATCCTC
CATGAGTGTA CGATCATCAG GGGTCAAGTA ACGAGTAGAG GCGAGAAAGT AAACCTCAAG
ATAGATATAA ATCGCAGAAA CAGCCTAGCC AGGAACCACT CGGCAACGCA TATACTACAT
CATGTTTTGA GAAAAAGGCT TGGTGCACAT GTCTCGCAAC GTGGCTCTCT CGTGGCACCG
AGTAGGTTGC GTTTCGATTT TAGTCACAGC CAATCTATCA CGGAGGAAGA GCTTTCTAAA
ATAGAGGACT GTATAAACCT TATGATCTGG GATGATCATC CTGTAATGAC AGAAATCAAA
AAGACTGATG AGGCTATAAG AGATGGCGCC ATTGGATTGT TCGGAGAAAA GTACGACGAT
ACGGTTCGTG TTGTCTCAAT AGGGGAAGCA GTAGAGCTAT GCGGAGGTAC GCACGTCAAA
AAAAGTTCAG CCATTGGACT AGTAAAGATT TTATCGGCGT CATCTGTGGC TCACGGTGTT
CGCAGAATAG AGGCAGTAAC GCATCTTACT GCCTTACAAT ACATACGAGA AGCGGAACAA
GCACAGCTTT ATCAACTTAC CGAACATCAA GCAAAGCTCA AAGCAATGCA AAAGAGCCAT
CAAAAAGAGA TTACACGCGT ATATCAGTCC ATTGTCACAA ATGCAGAAGC CCGAACAGAA
AGATATGGCT CAGTGGAAAT AATTACTAAA AATGTTCAGG GTATATCAAA AGAAATCCTG
CTGAGTCTTG CATCAGAAAT AAGACCCAAA ACGGGGGTGC TAATTGTTCA CACAGAACTG
AGCGAAGCCC TATATTCGCT CATCATACTC GATAAGGAGA TTTTCAAAAA CATAAGTTTT
ATAGATTCTA TGAAAGAGAC AATTGATAAA TCGCACGGAA AAGTTACCCC TTCTGTACCA
TATGTCATTC AGGCCACATT TTCTAAAAAA GAGGATCTGG ATCGCTGCCT AAAAAATTTA
TCTGAATTAG TAGTATCTAC CTTTTAG
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| Protein sequence | MIDGLRKKFI DFFVKNGHTY LPSASLVPKD DPSLMFVNAG MVPFKEYFVD VRRAPFSSIV
TAQKCVRAGG KHNDLENVGF TKRHHTFFEM LGNFSFGCYF KERAIELAWK FVTEELTLSK
KKLYITVYHE DDEAFEIWDK LTGFGERKIK RISTSDNFWQ MGDIGPCGPC SEIFYDHGEH
LSGDIPEDKK DPGERYVEIW NLVFMQYIRE QSGELARMEC PCIDTGMGLE RVAAILEGTD
DNYKTKLFEA IVKESQNVTG NKDNQAAHKV IADHLRSASF LIADGVLPGN TGREYVLRRI
IRRAVRYSHA LGFDTVLLPK LFWVLKEWMG SHYQELTRAE NLILDTLTLE EQSFRNTLKS
GMKLLEEVSS SMKEGDTLSG DIAFTLYDTH GFPLDITVDI LKERKISVDE EGFAERMKMQ
RLLAQASRMK DMAQTSSYEV KAVFLEHGKT PFIGYENFTG LALILAITEK EGSNKLTIIL
DQTIFYPESG GQESDQGIIE GENTLLKVEK VYKSTEGVIL HECTIIRGQV TSRGEKVNLK
IDINRRNSLA RNHSATHILH HVLRKRLGAH VSQRGSLVAP SRLRFDFSHS QSITEEELSK
IEDCINLMIW DDHPVMTEIK KTDEAIRDGA IGLFGEKYDD TVRVVSIGEA VELCGGTHVK
KSSAIGLVKI LSASSVAHGV RRIEAVTHLT ALQYIREAEQ AQLYQLTEHQ AKLKAMQKSH
QKEITRVYQS IVTNAEARTE RYGSVEIITK NVQGISKEIL LSLASEIRPK TGVLIVHTEL
SEALYSLIIL DKEIFKNISF IDSMKETIDK SHGKVTPSVP YVIQATFSKK EDLDRCLKNL
SELVVSTF
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