Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0156 |
Symbol | alaS |
ID | 3931384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | - |
Start bp | 124722 |
End bp | 127268 |
Gene Length | 2547 bp |
Protein Length | 848 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637900312 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_506054 |
Protein GI | 88608446 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGACG GCCTCAGAAA AAAATTCATA GATTTTTTCG TCAAAAACGG ACACACATAC CTTCCTTCTG CATCCTTAGT ACCGAAAGAC GATCCTTCAC TGATGTTCGT CAACGCGGGT ATGGTTCCAT TTAAGGAGTA CTTTGTGGAT GTCAGAAGAG CACCATTCTC GAGCATCGTA ACAGCACAAA AATGCGTGAG GGCTGGAGGT AAACACAATG ACTTGGAAAA CGTTGGATTT ACAAAACGGC ACCACACCTT TTTTGAGATG CTGGGAAATT TCAGCTTTGG CTGCTATTTC AAGGAAAGAG CAATAGAGTT AGCTTGGAAA TTTGTCACTG AAGAACTCAC GTTAAGTAAG AAAAAACTGT ACATTACAGT CTACCACGAG GACGATGAAG CGTTCGAGAT TTGGGATAAA TTAACAGGCT TCGGGGAAAG AAAAATCAAG AGAATTAGCA CAAGTGATAA TTTCTGGCAG ATGGGTGATA TTGGCCCGTG TGGTCCCTGC TCAGAGATCT TTTATGACCA TGGAGAACAC TTATCCGGTG ACATACCTGA AGATAAAAAG GACCCCGGGG AAAGATACGT CGAGATATGG AACCTCGTTT TCATGCAGTA CATAAGGGAA CAAAGCGGAG AACTGGCGCG CATGGAGTGT CCGTGTATAG ATACAGGAAT GGGGCTAGAA AGGGTGGCCG CAATTCTAGA GGGTACAGAT GATAACTATA AAACAAAATT GTTCGAAGCC ATTGTAAAGG AATCACAAAA TGTTACCGGC AACAAAGACA ATCAAGCTGC GCACAAAGTA ATAGCCGATC ATTTACGTTC TGCTAGTTTT CTTATAGCGG ATGGTGTTTT ACCAGGTAAT ACTGGACGTG AGTATGTCTT GAGGAGAATA ATACGCAGAG CAGTACGGTA CTCGCATGCA CTTGGTTTTG ATACGGTATT ATTACCAAAG CTTTTTTGGG TACTTAAGGA GTGGATGGGT AGTCATTACC AGGAACTCAC AAGAGCTGAG AATCTCATTT TAGATACATT AACACTAGAA GAACAATCTT TTCGAAACAC ACTCAAGTCA GGAATGAAAT TACTCGAGGA AGTTTCAAGC TCTATGAAGG AGGGCGATAC ATTATCTGGA GACATAGCAT TCACACTATA TGATACCCAC GGATTCCCAT TGGATATAAC GGTAGACATC TTAAAAGAGA GAAAAATTTC AGTCGATGAA GAAGGTTTTG CAGAAAGGAT GAAAATGCAA AGGCTCCTTG CTCAAGCTTC TCGGATGAAG GATATGGCAC AAACCTCAAG TTATGAGGTA AAAGCAGTGT TCCTAGAGCA CGGAAAAACA CCTTTTATTG GTTATGAAAA TTTTACAGGA TTAGCGCTTA TCCTTGCGAT AACAGAAAAA GAGGGATCTA ACAAACTGAC AATTATACTT GACCAAACGA TTTTCTACCC AGAATCAGGT GGTCAAGAGA GCGATCAAGG CATAATAGAA GGAGAAAATA CCCTGCTGAA GGTAGAAAAA GTCTACAAAT CTACTGAGGG AGTTATCCTC CATGAGTGTA CGATCATCAG GGGTCAAGTA ACGAGTAGAG GCGAGAAAGT AAACCTCAAG ATAGATATAA ATCGCAGAAA CAGCCTAGCC AGGAACCACT CGGCAACGCA TATACTACAT CATGTTTTGA GAAAAAGGCT TGGTGCACAT GTCTCGCAAC GTGGCTCTCT CGTGGCACCG AGTAGGTTGC GTTTCGATTT TAGTCACAGC CAATCTATCA CGGAGGAAGA GCTTTCTAAA ATAGAGGACT GTATAAACCT TATGATCTGG GATGATCATC CTGTAATGAC AGAAATCAAA AAGACTGATG AGGCTATAAG AGATGGCGCC ATTGGATTGT TCGGAGAAAA GTACGACGAT ACGGTTCGTG TTGTCTCAAT AGGGGAAGCA GTAGAGCTAT GCGGAGGTAC GCACGTCAAA AAAAGTTCAG CCATTGGACT AGTAAAGATT TTATCGGCGT CATCTGTGGC TCACGGTGTT CGCAGAATAG AGGCAGTAAC GCATCTTACT GCCTTACAAT ACATACGAGA AGCGGAACAA GCACAGCTTT ATCAACTTAC CGAACATCAA GCAAAGCTCA AAGCAATGCA AAAGAGCCAT CAAAAAGAGA TTACACGCGT ATATCAGTCC ATTGTCACAA ATGCAGAAGC CCGAACAGAA AGATATGGCT CAGTGGAAAT AATTACTAAA AATGTTCAGG GTATATCAAA AGAAATCCTG CTGAGTCTTG CATCAGAAAT AAGACCCAAA ACGGGGGTGC TAATTGTTCA CACAGAACTG AGCGAAGCCC TATATTCGCT CATCATACTC GATAAGGAGA TTTTCAAAAA CATAAGTTTT ATAGATTCTA TGAAAGAGAC AATTGATAAA TCGCACGGAA AAGTTACCCC TTCTGTACCA TATGTCATTC AGGCCACATT TTCTAAAAAA GAGGATCTGG ATCGCTGCCT AAAAAATTTA TCTGAATTAG TAGTATCTAC CTTTTAG
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Protein sequence | MIDGLRKKFI DFFVKNGHTY LPSASLVPKD DPSLMFVNAG MVPFKEYFVD VRRAPFSSIV TAQKCVRAGG KHNDLENVGF TKRHHTFFEM LGNFSFGCYF KERAIELAWK FVTEELTLSK KKLYITVYHE DDEAFEIWDK LTGFGERKIK RISTSDNFWQ MGDIGPCGPC SEIFYDHGEH LSGDIPEDKK DPGERYVEIW NLVFMQYIRE QSGELARMEC PCIDTGMGLE RVAAILEGTD DNYKTKLFEA IVKESQNVTG NKDNQAAHKV IADHLRSASF LIADGVLPGN TGREYVLRRI IRRAVRYSHA LGFDTVLLPK LFWVLKEWMG SHYQELTRAE NLILDTLTLE EQSFRNTLKS GMKLLEEVSS SMKEGDTLSG DIAFTLYDTH GFPLDITVDI LKERKISVDE EGFAERMKMQ RLLAQASRMK DMAQTSSYEV KAVFLEHGKT PFIGYENFTG LALILAITEK EGSNKLTIIL DQTIFYPESG GQESDQGIIE GENTLLKVEK VYKSTEGVIL HECTIIRGQV TSRGEKVNLK IDINRRNSLA RNHSATHILH HVLRKRLGAH VSQRGSLVAP SRLRFDFSHS QSITEEELSK IEDCINLMIW DDHPVMTEIK KTDEAIRDGA IGLFGEKYDD TVRVVSIGEA VELCGGTHVK KSSAIGLVKI LSASSVAHGV RRIEAVTHLT ALQYIREAEQ AQLYQLTEHQ AKLKAMQKSH QKEITRVYQS IVTNAEARTE RYGSVEIITK NVQGISKEIL LSLASEIRPK TGVLIVHTEL SEALYSLIIL DKEIFKNISF IDSMKETIDK SHGKVTPSVP YVIQATFSKK EDLDRCLKNL SELVVSTF
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